Orthologous regulated operons containing PF02589 gene
Regulog: | ExuR - Clostridia-1 |
Regulator type: | Transcription factor |
Regulator family: | LacI |
Regulation mode: | repressor |
Biological process: | Galacturonate utilization |
Effector: | Galacturonate |
Phylum: | Firmicutes |
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Operon | Position | Score | Sequence | Locus Tag of the First Gene |
---|---|---|---|---|
Clostridium acetobutylicum ATCC 824 | ||||
Position: -195
Score: 5.6835 Sequence: CTTTGTTAACGTTAACGTAA
Position: -72
Score: 5.71832 Sequence: TATTGATAACGTGAACACTA
Locus tag: CAC0359
Name: rhiN Funciton: Rhamnogalacturonides degradation protein RhiN
Locus tag: CAC0358
Name: PF01522 Funciton: Polysaccharide deacetylase
Locus tag: CAC0357
Name: rhiT Funciton: Putative rhamnogalacturonide transporter
Locus tag: CAC0356
Name: PF02589 Funciton: Domain of unknown function DUF162
Locus tag: CAC0355
Name: pgl Funciton: Polygalacturonase (EC 3.2.1.15) |
||||
rhiN-PF01522-rhiT-PF02589-pgl | -195 | 5.7 | CTTTGTTAACGTTAACGTAA | CAC0359 |
-72 | 5.7 | TATTGATAACGTGAACACTA | ||
Clostridium butyricum 5521 | ||||
Position: -197
Score: 4.4807 Sequence: TTTGGAAAACGTGTTCAATT
Position: -96
Score: 4.9538 Sequence: AAATGTGCACGTGTGCAAAA
Locus tag: CBY_0243
Name: rhiN Funciton: Rhamnogalacturonides degradation protein RhiN
Locus tag: CBY_0242
Name: PF02589 Funciton: Domain of unknown function DUF162
Locus tag: CBY_0241
Name: PF01522 Funciton: Polysaccharide deacetylase
Locus tag: CBY_0240
Name: rhiT Funciton: Putative rhamnogalacturonide transporter
Locus tag: CBY_0239
Name: pgl Funciton: Polygalacturonase (EC 3.2.1.15) |
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rhiN-PF02589-PF01522-rhiT-pgl | -197 | 4.5 | TTTGGAAAACGTGTTCAATT | CBY_0243 |
-96 | 5 | AAATGTGCACGTGTGCAAAA |