Orthologous regulated operons containing nifB gene

Properties
Regulog:	RpoN - Desulfovibrionales
Regulator type:	Transcription factor
Regulator family:	Sigma54
Regulation mode:
Biological process:	Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism
Effector:
Phylum:	Proteobacteria

Built upon 487 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Desulfomicrobium baculatum DSM 4028
Position: -81 Score: 5.08658 Sequence: TTTGGCACGCCCGTTGCCC Locus tag: Dbac_0834 Name: nifH Funciton: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH Locus tag: Dbac_0835 Name: glnB-3 Funciton: Nitrogen regulatory protein P-II Locus tag: Dbac_0836 Name: glnB-2 Funciton: Nitrogen regulatory protein P-II Locus tag: Dbac_0837 Name: nifD Funciton: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) Locus tag: Dbac_0838 Name: nifK Funciton: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) Locus tag: Dbac_0839 Name: DvMF_2618 Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB Locus tag: Dbac_0840 Name: null Funciton: Ferredoxin, 2Fe-2S Locus tag: Dbac_0841 Name: nifE Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE Locus tag: Dbac_0842 Name: nifN Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN Locus tag: Dbac_0843 Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
nifH-glnB-3-glnB-2-nifD-nifK-DvMF_2618-Dbac_0840-nifE-nifN-nifB	-81	5.1	TTTGGCACGCCCGTTGCCC	Dbac_0834
Desulfovibrio magneticus RS-1
Position: -62 Score: 4.93293 Sequence: TCTGGCACGCTCCTTGTAG Locus tag: DMR_17520 Name: nifE Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE Locus tag: DMR_17510 Name: nifN Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN Locus tag: DMR_17500 Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
nifE-nifN-nifB	-62	4.9	TCTGGCACGCTCCTTGTAG	DMR_17520
Desulfovibrio salexigens DSM 2638
Position: -69 Score: 5.09273 Sequence: TTTGGCACACCACTTGCCT Locus tag: Desal_0447 Name: nifH Funciton: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH Locus tag: Desal_0446 Name: glnB-3 Funciton: Nitrogen regulatory protein P-II Locus tag: Desal_0445 Name: glnB-2 Funciton: Nitrogen regulatory protein P-II Locus tag: Desal_0444 Name: nifD Funciton: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) Locus tag: Desal_0443 Name: nifK Funciton: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) Locus tag: Desal_0442 Name: DvMF_2618 Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB Locus tag: Desal_0441 Name: null Funciton: Ferredoxin, 2Fe-2S Locus tag: Desal_0440 Name: null Funciton: GCN5-related N-acetyltransferase Locus tag: Desal_0439 Name: nifE Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE Locus tag: Desal_0438 Name: nifN Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN Locus tag: Desal_0437 Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
nifH-glnB-3-glnB-2-nifD-nifK-DvMF_2618-Desal_0441-Desal_0440-nifE-nifN-nifB	-69	5.1	TTTGGCACACCACTTGCCT	Desal_0447
Desulfovibrio vulgaris Hildenborough
Position: -326 Score: 4.70353 Sequence: CATGGCACATCCCTTGCCC Locus tag: DVUA0015 Name: nifH Funciton: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH Locus tag: DVUA0014 Name: glnB-3 Funciton: Nitrogen regulatory protein P-II Locus tag: DVUA0013 Name: glnB-2 Funciton: Nitrogen regulatory protein P-II Locus tag: DVUA0012 Name: nifD Funciton: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) Locus tag: DVUA0011 Name: nifK Funciton: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) Locus tag: DVUA0010 Name: null Funciton: Ferredoxin, 2Fe-2S Locus tag: DVUA0009 Name: nifE Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE Locus tag: DVUA0008 Name: nifN Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN Locus tag: DVUA0007 Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
nifH-glnB-3-glnB-2-nifD-nifK-DVUA0010-nifE-nifN-nifB	-326	4.7	CATGGCACATCCCTTGCCC	DVUA0015
Desulfovibrio vulgaris str. Miyazaki F
Position: -110 Score: 4.76905 Sequence: ACTGGCACGGGGTTTGCCC Locus tag: DvMF_2613 Name: nifH Funciton: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH Locus tag: DvMF_2614 Name: glnB-3 Funciton: Nitrogen regulatory protein P-II Locus tag: DvMF_2615 Name: glnB-2 Funciton: Nitrogen regulatory protein P-II Locus tag: DvMF_2616 Name: nifD Funciton: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) Locus tag: DvMF_2617 Name: nifK Funciton: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) Locus tag: DvMF_2618 Name: DvMF_2618 Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB Locus tag: DvMF_2619 Name: null Funciton: Ferredoxin, 2Fe-2S Locus tag: DvMF_2620 Name: nifE Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE Locus tag: DvMF_2621 Name: nifN Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN Locus tag: DvMF_2622 Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
nifH-glnB-3-glnB-2-nifD-nifK-DvMF_2618-DvMF_2619-nifE-nifN-nifB	-110	4.8	ACTGGCACGGGGTTTGCCC	DvMF_2613