Orthologous regulated operons containing glnB gene

Properties
Regulog:	RpoN - Desulfovibrionales
Regulator type:	Transcription factor
Regulator family:	Sigma54
Regulation mode:
Biological process:	Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism
Effector:
Phylum:	Proteobacteria

Built upon 487 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Desulfohalobium retbaense DSM 5692
Position: -53 Score: 5.11115 Sequence: TTTGGCACCTCTCTTGCCT Locus tag: Dret_2267 Name: amt Funciton: Ammonium transporter Locus tag: Dret_2268 Name: glnB Funciton: Nitrogen regulatory protein P-II Locus tag: Dret_2269 Name: glnD Funciton: [Protein-PII] uridylyltransferase (EC 2.7.7.59)
amt-glnB-glnD	-53	5.1	TTTGGCACCTCTCTTGCCT	Dret_2267
Desulfomicrobium baculatum DSM 4028
Position: -45 Score: 5.23919 Sequence: TATGGCACCGTCCTTGCTC Locus tag: Dbac_3048 Name: null Funciton: ammonium transporter Locus tag: Dbac_3047 Name: null Funciton: nitrogen regulatory protein P-II Locus tag: Dbac_3046 Name: null Funciton: UTP-GlnB uridylyltransferase, GlnD
Dbac_3048-Dbac_3047-Dbac_3046	-45	5.2	TATGGCACCGTCCTTGCTC	Dbac_3048
Desulfovibrio desulfuricans G20
Position: -75 Score: 5.19045 Sequence: TCTGGCCTGCTGCTTGCTT Locus tag: Dde_2311 Name: amt Funciton: Ammonium transporter Locus tag: Dde_2310 Name: glnB Funciton: Nitrogen regulatory protein P-II Locus tag: Dde_2309 Name: glnD Funciton: Probable [Protein-PII] uridylyltransferase
amt-glnB-glnD	-75	5.2	TCTGGCCTGCTGCTTGCTT	Dde_2311
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Position: -126 Score: 4.74915 Sequence: CTTGGCACAGATAGTGCTT Locus tag: Ddes_1147 Name: amt Funciton: Ammonium transporter Locus tag: Ddes_1148 Name: glnB Funciton: Nitrogen regulatory protein P-II Locus tag: Ddes_1149 Name: null Funciton: Glutamine synthetase type III, GlnN (EC 6.3.1.2)
amt-glnB-Ddes_1149	-126	4.7	CTTGGCACAGATAGTGCTT	Ddes_1147
Desulfovibrio piger ATCC 29098
Position: -127 Score: 5.14211 Sequence: TATGGCACAGGGCTTGCTT Locus tag: DESPIG_00642 Name: amt Funciton: Ammonium transporter Locus tag: DESPIG_00641 Name: glnB Funciton: Nitrogen regulatory protein P-II Locus tag: DESPIG_00640 Name: null Funciton: hypothetical protein Locus tag: DESPIG_00639 Name: null Funciton: Glutamine synthetase type III, GlnN (EC 6.3.1.2)
amt-glnB-DESPIG_00640-DESPIG_00639	-127	5.1	TATGGCACAGGGCTTGCTT	DESPIG_00642
Desulfovibrio salexigens DSM 2638
Position: -145 Score: 4.83159 Sequence: TTTGGCACAATGCGTGCTT Locus tag: Desal_3438 Name: amt Funciton: Ammonium transporter Locus tag: Desal_3437 Name: glnB Funciton: Nitrogen regulatory protein P-II Locus tag: Desal_3436 Name: glnD Funciton: [Protein-PII] uridylyltransferase (EC 2.7.7.59)
amt-glnB-glnD	-145	4.8	TTTGGCACAATGCGTGCTT	Desal_3438
Desulfovibrio vulgaris Hildenborough
Position: -81 Score: 5.04557 Sequence: GTTGGCACGCGACTTGCCT Locus tag: DVU1231 Name: amt Funciton: Ammonium transporter Locus tag: DVU1232 Name: glnB-1 Funciton: Nitrogen regulatory protein P-II Locus tag: DVU1233 Name: glnD Funciton: Probable [Protein-PII] uridylyltransferase
amt-glnB-1-glnD	-81	5	GTTGGCACGCGACTTGCCT	DVU1231
Desulfovibrio vulgaris str. Miyazaki F
Position: -98 Score: 5.32954 Sequence: GATGGCACGCTCCTTGCCT Locus tag: DvMF_0866 Name: amt Funciton: Ammonium transporter Locus tag: DvMF_0865 Name: glnB Funciton: Nitrogen regulatory protein P-II Locus tag: DvMF_0864 Name: glnD Funciton: [Protein-PII] uridylyltransferase (EC 2.7.7.59)
amt-glnB-glnD	-98	5.3	GATGGCACGCTCCTTGCCT	DvMF_0866

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Orthologous regulated operons containing glnB gene

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --