Orthologous regulated operons containing DvMF_2428 gene

Properties
Regulog:	RpoN - Desulfovibrionales
Regulator type:	Transcription factor
Regulator family:	Sigma54
Regulation mode:
Biological process:	Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism
Effector:
Phylum:	Proteobacteria

Built upon 487 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Desulfovibrio piger ATCC 29098
Position: -54 Score: 5.22538 Sequence: CATGGCACGCTTTATGCTT Locus tag: DESPIG_00690 Name: null Funciton: hypothetical protein Locus tag: DESPIG_00691 Name: null Funciton: hypothetical protein Locus tag: DESPIG_00692 Name: null Funciton: hypothetical protein Locus tag: DESPIG_00693 Name: null Funciton: Type III secretion chaperone protein for YopD (SycD) Locus tag: DESPIG_00694 Name: null Funciton: Type III secretion host injection protein (YopB) Locus tag: DESPIG_00695 Name: null Funciton: Type III secretion host injection and negative regulator protein (YopD) Locus tag: DESPIG_00696 Name: null Funciton: Tir chaperone family protein Locus tag: DESPIG_00697 Name: yscC Funciton: Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG) Locus tag: DESPIG_00698 Name: null Funciton: Type III secretion inner membrane protein (YscD,homologous to flagellar export components) Locus tag: DESPIG_00699 Name: null Funciton: hypothetical protein Locus tag: DESPIG_00700 Name: null Funciton: Type III secretion system protein, YscF family Locus tag: DESPIG_00701 Name: null Funciton: hypothetical protein Locus tag: DESPIG_00702 Name: null Funciton: hypothetical protein Locus tag: DESPIG_00703 Name: escJ Funciton: Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) Locus tag: DESPIG_00704 Name: null Funciton: hypothetical protein Locus tag: DESPIG_00705 Name: sctL Funciton: type III secretion protein, YopL family putative type III secretion protein Locus tag: DESPIG_00706 Name: null Funciton: Type III secretion cytoplasmic ATP synthase (EC 3.6.3.14, YscN,SpaL,MxiB,HrcN,EscN) Locus tag: DESPIG_00707 Name: null Funciton: Type III secretion spans bacterial envelope protein (YscO)
DESPIG_00690-DESPIG_00691-DESPIG_00692-DESPIG_00693-DESPIG_00694-DESPIG_00695-DESPIG_00696-yscC-DESPIG_00698-DESPIG_00699-DESPIG_00700-DESPIG_00701-DESPIG_00702-escJ-DESPIG_00704-sctL-DESPIG_00706-DESPIG_00707	-54	5.2	CATGGCACGCTTTATGCTT	DESPIG_00690
Desulfovibrio vulgaris Hildenborough
Position: -62 Score: 4.64067 Sequence: CATGGCATACTTGCTGCTA Locus tag: DVUA203 Name: DVUA203 Funciton: hypothetical protein Locus tag: DVUA0109 Name: null Funciton: Type III secretion chaperone protein for YopD (SycD) Locus tag: DVUA0110 Name: null Funciton: Type III secretion host injection protein (YopB) Locus tag: DVUA0111 Name: null Funciton: Type III secretion host injection and negative regulator protein (YopD) Locus tag: DVUA201 Name: DVUA201 (DVUA0111.1) Funciton: Tir chaperone family protein Locus tag: DVUA0112 Name: null Funciton: Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG) Locus tag: DVUA0113 Name: null Funciton: Type III secretion inner membrane protein (YscD,homologous to flagellar export components) Locus tag: DVUA0114 Name: null Funciton: hypothetical protein Locus tag: DVUA0115 Name: null Funciton: Type III secretion system protein, YscF family Locus tag: DVUA0116 Name: null Funciton: hypothetical protein Locus tag: DORF2111 Name: DORF2111 Funciton: null Locus tag: DVUA0117 Name: escJ Funciton: Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) Locus tag: DVUA200 Name: DVUA200 Funciton: null Locus tag: DVUA0118 Name: sctL Funciton: type III secretion protein, YopL family putative type III secretion protein Locus tag: DVUA0119 Name: sctN Funciton: Type III secretion cytoplasmic ATP synthase (EC 3.6.3.14, YscN,SpaL,MxiB,HrcN,EscN) Locus tag: DVUA0119.1 Name: DVUA0119.1 Funciton: null Locus tag: DVUA0120 Name: null Funciton: HpaP protein; Type III secretion protein (YscP) Locus tag: DVUA0121 Name: null Funciton: Type III secretion inner membrane protein (YscQ,homologous to flagellar export components) Locus tag: DVUA0122 Name: yscR Funciton: Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components) Locus tag: DVUA0123 Name: null Funciton: anti-anti-sigma factor Locus tag: DVUA0124 Name: rsbW Funciton: putative anti-sigma regulatory factor, serine/threonine protein kinase Locus tag: DVUA0125 Name: slt Funciton: transglycosylase, SLT family
DVUA203-DVUA0109-DVUA0110-DVUA0111-DVUA201 (DVUA0111.1)-DVUA0112-DVUA0113-DVUA0114-DVUA0115-DVUA0116-DORF2111-escJ-DVUA200-sctL-sctN-DVUA0119.1-DVUA0120-DVUA0121-yscR-DVUA0123-rsbW-slt	-62	4.6	CATGGCATACTTGCTGCTA	DVUA203
Desulfovibrio vulgaris str. Miyazaki F
Position: -56 Score: 4.64875 Sequence: TTTGGCATCCTTGCTGCAA Locus tag: DvMF_2420 Name: null Funciton: hypothetical protein Locus tag: DvMF_2421 Name: null Funciton: hypothetical protein Locus tag: DvMF_2422 Name: null Funciton: Type III secretion chaperone protein for YopD (SycD) Locus tag: DvMF_2423 Name: null Funciton: Type III secretion host injection protein (YopB) Locus tag: DvMF_2424 Name: null Funciton: Type III secretion host injection and negative regulator protein (YopD) Locus tag: DvMF_2425 Name: null Funciton: Tir chaperone family protein Locus tag: DvMF_2426 Name: yscC Funciton: Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG) Locus tag: DvMF_2427 Name: null Funciton: Type III secretion inner membrane protein (YscD,homologous to flagellar export components) Locus tag: DvMF_2428 Name: null Funciton: hypothetical protein Locus tag: DvMF_2429 Name: null Funciton: Type III secretion system protein, YscF family Locus tag: DvMF_2430 Name: null Funciton: hypothetical protein Locus tag: DvMF_2431 Name: null Funciton: hypothetical protein Locus tag: DvMF_2432 Name: escJ Funciton: Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) Locus tag: DvMF_2433 Name: null Funciton: hypothetical protein Locus tag: DvMF_2434 Name: sctL Funciton: type III secretion protein, YopL family putative type III secretion protein
DvMF_2420-DvMF_2421-DvMF_2422-DvMF_2423-DvMF_2424-DvMF_2425-yscC-DvMF_2427-DvMF_2428-DvMF_2429-DvMF_2430-DvMF_2431-escJ-DvMF_2433-sctL	-56	4.6	TTTGGCATCCTTGCTGCAA	DvMF_2420