Orthologous regulated operons containing pss gene

Properties
Regulog:	RpoN - Desulfovibrionales
Regulator type:	Transcription factor
Regulator family:	Sigma54
Regulation mode:
Biological process:	Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism
Effector:
Phylum:	Proteobacteria

Built upon 487 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Desulfomicrobium baculatum DSM 4028
Position: -311 Score: 3.90797 Sequence: CCGGGCATTGAACTTGCTC Locus tag: Dbac_2224 Name: null Funciton: PEP-CTERM system TPR-repeat lipoprotein Locus tag: Dbac_2223 Name: null Funciton: Exopolysaccharide production protein Pss (pss) Locus tag: Dbac_2222 Name: null Funciton: polysaccharide export protein, PEP-CTERM sytem-associated Locus tag: Dbac_2221 Name: null Funciton: Lipopolysaccharide biosynthesis chain length determinant protein Locus tag: Dbac_2220 Name: null Funciton: Protein-tyrosine kinase (EC 2.7.1.112) Locus tag: Dbac_2219 Name: exeA Funciton: Secretion ATPase, PEP-CTERM locus subfamily
Dbac_2224-Dbac_2223-Dbac_2222-Dbac_2221-Dbac_2220-exeA	-311	3.9	CCGGGCATTGAACTTGCTC	Dbac_2224
Desulfovibrio desulfuricans G20
Position: -94 Score: 4.79762 Sequence: TGTGGCACGGTTTTGGCTA Locus tag: Dde_0828 Name: null Funciton: PEP-CTERM system TPR-repeat lipoprotein Locus tag: Dde_0829 Name: pss Funciton: Exopolysaccharide production protein Pss (pss) Locus tag: Dde_0830 Name: null Funciton: polysaccharide export protein, PEP-CTERM sytem-associated Locus tag: Dde_0831 Name: null Funciton: Lipopolysaccharide biosynthesis chain length determinant protein Locus tag: Dde_0832 Name: null Funciton: Protein-tyrosine kinase (EC 2.7.1.112) Locus tag: Dde_0833 Name: exeA Funciton: Secretion ATPase, PEP-CTERM locus subfamily
Dde_0828-pss-Dde_0830-Dde_0831-Dde_0832-exeA	-94	4.8	TGTGGCACGGTTTTGGCTA	Dde_0828
Desulfovibrio vulgaris Hildenborough
Position: 29 Score: 4.47399 Sequence: TGTGGCACGGTATTGGCTC Locus tag: DVUA0036 Name: null Funciton: PEP-CTERM system TPR-repeat lipoprotein Locus tag: DVUA0037 Name: null Funciton: Exopolysaccharide production protein Pss (pss) Locus tag: DVUA0038 Name: b0983 Funciton: polysaccharide export protein, PEP-CTERM sytem-associated Locus tag: DVUA0039 Name: null Funciton: Lipopolysaccharide biosynthesis chain length determinant protein Locus tag: DVUA0040 Name: null Funciton: Protein-tyrosine kinase (EC 2.7.1.112) Locus tag: DVUA0041 Name: exeA Funciton: Secretion ATPase, PEP-CTERM locus subfamily
DVUA0036-DVUA0037-b0983-DVUA0039-DVUA0040-exeA	29	4.5	TGTGGCACGGTATTGGCTC	DVUA0036
Desulfovibrio vulgaris str. Miyazaki F
Position: -61 Score: 4.34041 Sequence: GCTGGCATGGTATTGGCTC Locus tag: DvMF_0691 Name: null Funciton: PEP-CTERM system TPR-repeat lipoprotein Locus tag: DvMF_0690 Name: pss Funciton: Exopolysaccharide production protein Pss (pss) Locus tag: DvMF_0689 Name: null Funciton: polysaccharide export protein, PEP-CTERM sytem-associated Locus tag: DvMF_0688 Name: null Funciton: Lipopolysaccharide biosynthesis chain length determinant protein Locus tag: DvMF_0687 Name: null Funciton: Protein-tyrosine kinase (EC 2.7.1.112) Locus tag: DvMF_0686 Name: exeA Funciton: Secretion ATPase, PEP-CTERM locus subfamily
DvMF_0691-pss-DvMF_0689-DvMF_0688-DvMF_0687-exeA	-61	4.3	GCTGGCATGGTATTGGCTC	DvMF_0691