Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing dctM gene

Properties
Regulog: RpoN - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Sigma54
Regulation mode:
Biological process: Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism
Effector:
Phylum: Proteobacteria
Built upon 487 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Desulfomicrobium baculatum DSM 4028
Position: -109
Score: 4.87112
Sequence: GATGGCATGCATTCTGCTC
Locus tag: Dbac_1588
Name: dtcP
Funciton: TRAP-type C4-dicarboxylate transport system, periplasmic component
Locus tag: Dbac_1589
Name: dctM
Funciton: TRAP dicarboxylate transporter, DctM subunit
Locus tag: Dbac_1590
Name: null
Funciton: amidohydrolase family protein
dtcP-dctM-Dbac_1590 -109 4.9 GATGGCATGCATTCTGCTC Dbac_1588
Desulfovibrio desulfuricans G20
Position: -187
Score: 4.42307
Sequence: ATTGGAACACGCCTTGCCG
Position: -84
Score: 4.71613
Sequence: TTTGGCACATTACCTGCTC
Locus tag: Dde_1275
Name: dtcP
Funciton: TRAP-type C4-dicarboxylate transport system, periplasmic component
Locus tag: Dde_1274
Name: dctM
Funciton: TRAP dicarboxylate transporter, DctM subunit
Locus tag: Dde_1273
Name: null
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
Locus tag: Dde_1272
Name: null
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
dtcP-dctM-Dde_1273-Dde_1272 -187 4.4 ATTGGAACACGCCTTGCCG Dde_1275
-84 4.7 TTTGGCACATTACCTGCTC
Desulfovibrio vulgaris Hildenborough
Position: -91
Score: 5.13015
Sequence: TTTGGCACGTTCCCTGCTC
Locus tag: DVU2822
Name: dtcP
Funciton: TRAP-type C4-dicarboxylate transport system, periplasmic component
Locus tag: DVU2823
Name: dctM
Funciton: TRAP dicarboxylate transporter, DctM subunit
Locus tag: DVU2824
Name: null
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
Locus tag: DVU2825
Name: null
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
dtcP-dctM-DVU2824-DVU2825 -91 5.1 TTTGGCACGTTCCCTGCTC DVU2822
Desulfovibrio vulgaris str. Miyazaki F
Position: -183
Score: 4.19385
Sequence: GACGGCATGTCGGTTGCAA
Locus tag: DvMF_1932
Name: dtcP
Funciton: TRAP-type C4-dicarboxylate transport system, periplasmic component
Locus tag: DvMF_1931
Name: dctM
Funciton: TRAP dicarboxylate transporter, DctM subunit
Locus tag: DvMF_1930
Name: null
Funciton: hypothetical protein
dtcP-dctM-DvMF_1930 -183 4.2 GACGGCATGTCGGTTGCAA DvMF_1932