Orthologous regulated operons containing sctV gene
| Regulog: | RpoN - Desulfovibrionales |
| Regulator type: | Transcription factor |
| Regulator family: | Sigma54 |
| Regulation mode: | |
| Biological process: | Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism |
| Effector: | |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Desulfovibrio piger ATCC 29098 | ||||
|
Position: -73
Score: 4.487 Sequence: TGTGGCATGATTCTGGCAT
Locus tag: DESPIG_00689
Name: null Funciton: Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) / Type III secretion outermembrane negative regulator of secretion (TyeA)
Locus tag: DESPIG_00688
Name: sycN Funciton: Type III secretion chaperone SycN
Locus tag: DESPIG_00687
Name: null Funciton: hypothetical protein
Locus tag: DESPIG_00686
Name: null Funciton: Chaperone protein YscY (Yop proteins translocation protein Y)
Locus tag: DESPIG_00685
Name: sctV Funciton: Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV)
Locus tag: DESPIG_00684
Name: invX Funciton: Type III secretion inner membrane protein (YscS,homologous to flagellar export components)
Locus tag: DESPIG_00683
Name: escT Funciton: Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components)
Locus tag: DESPIG_00682
Name: flhB Funciton: Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components)
Locus tag: DESPIG_00681
Name: flrC Funciton: sigma54 specific transcriptional regulator, Fis family
Locus tag: DESPIG_00680
Name: null Funciton: protein serine/threonine phosphatase |
||||
| DESPIG_00689-sycN-DESPIG_00687-DESPIG_00686-sctV-invX-escT-flhB-flrC-DESPIG_00680 | -73 | 4.5 | TGTGGCATGATTCTGGCAT | DESPIG_00689 |
| Desulfovibrio vulgaris Hildenborough | ||||
|
Position: -257
Score: 4.51052 Sequence: TCTGGCCCGCTTTTCGCAA
Locus tag: DVUA0106
Name: null Funciton: Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) / Type III secretion outermembrane negative regulator of secretion (TyeA)
Locus tag: DVUA0105
Name: sycN Funciton: Type III secretion chaperone SycN
Locus tag: DORF831
Name: DORF831 Funciton: hypothetical protein
Locus tag: DVUA0104.1
Name: DVUA0104.1 Funciton: Chaperone protein YscY (Yop proteins translocation protein Y)
Locus tag: DVUA0104
Name: sctV Funciton: Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) |
||||
| DVUA0106-sycN-DORF831-DVUA0104.1-sctV | -257 | 4.5 | TCTGGCCCGCTTTTCGCAA | DVUA0106 |
| Desulfovibrio vulgaris str. Miyazaki F | ||||
|
Position: -63
Score: 3.97852 Sequence: CATGGCGTGATTCTCGCAT
Locus tag: DvMF_2419
Name: null Funciton: Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) / Type III secretion outermembrane negative regulator of secretion (TyeA)
Locus tag: DvMF_2418
Name: sycN Funciton: Type III secretion chaperone SycN
Locus tag: DvMF_2417
Name: null Funciton: hypothetical protein
Locus tag: DvMF_2416
Name: null Funciton: Chaperone protein YscY (Yop proteins translocation protein Y)
Locus tag: DvMF_2415
Name: sctV Funciton: Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV)
Locus tag: DvMF_2414
Name: invX Funciton: Type III secretion inner membrane protein (YscS,homologous to flagellar export components)
Locus tag: DvMF_2413
Name: escT Funciton: Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components)
Locus tag: DvMF_2412
Name: flhB Funciton: Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components) |
||||
| DvMF_2419-sycN-DvMF_2417-DvMF_2416-sctV-invX-escT-flhB | -63 | 4 | CATGGCGTGATTCTCGCAT | DvMF_2419 |