Orthologous regulated operons containing sucD gene
| Regulog: | PckR - Rhizobiales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Central carbohydrate metabolism |
| Effector: | |
| Phylum: | Proteobacteria/Alpha |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Agrobacterium tumefaciens str. C58 (Cereon) | ||||
|
Position: -136
Score: 5.07139 Sequence: TGATCTAAACGATTGAAAAT
Locus tag: Atu2639
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Atu2638
Name: sucC Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Atu2637
Name: sucD Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Locus tag: Atu2636
Name: sucA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Atu2635
Name: sucB Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
||||
| mdh-sucC-sucD-sucA-sucB | -136 | 5.1 | TGATCTAAACGATTGAAAAT | Atu2639 |
| Brucella melitensis 16M | ||||
|
Position: -155
Score: 5.02221 Sequence: AAATCTAACCGATTGAAAAC
Locus tag: BMEI0137
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: BMEI0138
Name: sucC Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: BMEI0139
Name: sucD Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) |
||||
| mdh-sucC-sucD | -155 | 5 | AAATCTAACCGATTGAAAAC | BMEI0137 |
| Mesorhizobium loti MAFF303099 | ||||
|
Position: -179
Score: 4.88667 Sequence: CCATCTAACCGATTGAAAAT
Locus tag: mll4308
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: mll4306
Name: sucC Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: mll4305
Name: null Funciton: Mannose-6-phosphate isomerase
Locus tag: mll4304
Name: RL4437 Funciton: hypothetical protein
Locus tag: mll4303
Name: sucD Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Locus tag: mll4302
Name: null Funciton: unknown protein
Locus tag: mll4301
Name: sucA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: mll4300
Name: sucB Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
||||
| mdh-sucC-mll4305-RL4437-sucD-mll4302-sucA-sucB | -179 | 4.9 | CCATCTAACCGATTGAAAAT | mll4308 |
| Mesorhizobium sp. BNC1 | ||||
|
Position: -158
Score: 4.98039 Sequence: CCATCTAAACGATTGAAAAA
Locus tag: Meso_3395
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Meso_3396
Name: sucC Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Meso_3397
Name: sucD Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Locus tag: Meso_3398
Name: sucA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Meso_3399
Name: sucB Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
||||
| mdh-sucC-sucD-sucA-sucB | -158 | 5 | CCATCTAAACGATTGAAAAA | Meso_3395 |
| Rhizobium etli CFN 42 | ||||
|
Position: -132
Score: 4.99181 Sequence: GCATCTAAACGATTGAAAAT
Locus tag: RHE_CH03891
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: RHE_CH03890
Name: sucC Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: RHE_CH03889
Name: sucD Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Locus tag: RHE_CH03888
Name: sucA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
||||
| mdh-sucC-sucD-sucA | -132 | 5 | GCATCTAAACGATTGAAAAT | RHE_CH03891 |
| Rhizobium leguminosarum bv. viciae 3841 | ||||
|
Position: -135
Score: 5.05045 Sequence: GTATCTAAACGATTGAAAAC
Locus tag: RL4439
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: RL4438
Name: sucC Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: RL4437
Name: RL4437 Funciton: hypothetical protein
Locus tag: RL4436
Name: sucD Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Locus tag: RL4435
Name: sucA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: RL4434
Name: AZC_4012 Funciton: hypothetical protein
Locus tag: RL4433
Name: sucB Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
||||
| mdh-sucC-RL4437-sucD-sucA-AZC_4012-sucB | -135 | 5.1 | GTATCTAAACGATTGAAAAC | RL4439 |
| Rhizobium sp. NGR234 | ||||
|
Position: -138
Score: 4.89835 Sequence: TGATCTAACCGATTGAATTT
Locus tag: NGR_c31300
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: NGR_c31290
Name: sucC Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: NGR_c31280
Name: sucD Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Locus tag: NGR_c31270
Name: sucA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: NGR_c31260
Name: sucB Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
||||
| mdh-sucC-sucD-sucA-sucB | -138 | 4.9 | TGATCTAACCGATTGAATTT | NGR_c31300 |
| Sinorhizobium meliloti 1021 | ||||
|
Position: -140
Score: 4.95071 Sequence: CGATCTAACCGATTGAAATT
Locus tag: SMc02479
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: SMc02480
Name: sucC Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: SMc02481
Name: sucD Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) |
||||
| mdh-sucC-sucD | -140 | 5 | CGATCTAACCGATTGAAATT | SMc02479 |