Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing mdh gene

Properties
Regulog: PckR - Rhizobiales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Central carbohydrate metabolism
Effector:
Phylum: Proteobacteria/Alpha
Built upon 99 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Agrobacterium tumefaciens str. C58 (Cereon)
Position: -136
Score: 5.07139
Sequence: TGATCTAAACGATTGAAAAT
Locus tag: Atu2639
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Atu2638
Name: sucC
Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Atu2637
Name: sucD
Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Locus tag: Atu2636
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Atu2635
Name: sucB
Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
mdh-sucC-sucD-sucA-sucB -136 5.1 TGATCTAAACGATTGAAAAT Atu2639
Brucella melitensis 16M
Position: -155
Score: 5.02221
Sequence: AAATCTAACCGATTGAAAAC
Locus tag: BMEI0137
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: BMEI0138
Name: sucC
Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: BMEI0139
Name: sucD
Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
mdh-sucC-sucD -155 5 AAATCTAACCGATTGAAAAC BMEI0137
Mesorhizobium loti MAFF303099
Position: -179
Score: 4.88667
Sequence: CCATCTAACCGATTGAAAAT
Locus tag: mll4308
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: mll4306
Name: sucC
Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: mll4305
Name: null
Funciton: Mannose-6-phosphate isomerase
Locus tag: mll4304
Name: RL4437
Funciton: hypothetical protein
Locus tag: mll4303
Name: sucD
Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Locus tag: mll4302
Name: null
Funciton: unknown protein
Locus tag: mll4301
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: mll4300
Name: sucB
Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
mdh-sucC-mll4305-RL4437-sucD-mll4302-sucA-sucB -179 4.9 CCATCTAACCGATTGAAAAT mll4308
Mesorhizobium sp. BNC1
Position: -158
Score: 4.98039
Sequence: CCATCTAAACGATTGAAAAA
Locus tag: Meso_3395
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Meso_3396
Name: sucC
Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Meso_3397
Name: sucD
Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Locus tag: Meso_3398
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Meso_3399
Name: sucB
Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
mdh-sucC-sucD-sucA-sucB -158 5 CCATCTAAACGATTGAAAAA Meso_3395
Rhizobium etli CFN 42
Position: -132
Score: 4.99181
Sequence: GCATCTAAACGATTGAAAAT
Locus tag: RHE_CH03891
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: RHE_CH03890
Name: sucC
Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: RHE_CH03889
Name: sucD
Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Locus tag: RHE_CH03888
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
mdh-sucC-sucD-sucA -132 5 GCATCTAAACGATTGAAAAT RHE_CH03891
Rhizobium leguminosarum bv. viciae 3841
Position: -135
Score: 5.05045
Sequence: GTATCTAAACGATTGAAAAC
Locus tag: RL4439
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: RL4438
Name: sucC
Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: RL4437
Name: RL4437
Funciton: hypothetical protein
Locus tag: RL4436
Name: sucD
Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Locus tag: RL4435
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: RL4434
Name: AZC_4012
Funciton: hypothetical protein
Locus tag: RL4433
Name: sucB
Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
mdh-sucC-RL4437-sucD-sucA-AZC_4012-sucB -135 5.1 GTATCTAAACGATTGAAAAC RL4439
Rhizobium sp. NGR234
Position: -138
Score: 4.89835
Sequence: TGATCTAACCGATTGAATTT
Locus tag: NGR_c31300
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: NGR_c31290
Name: sucC
Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: NGR_c31280
Name: sucD
Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Locus tag: NGR_c31270
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: NGR_c31260
Name: sucB
Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
mdh-sucC-sucD-sucA-sucB -138 4.9 TGATCTAACCGATTGAATTT NGR_c31300
Sinorhizobium meliloti 1021
Position: -140
Score: 4.95071
Sequence: CGATCTAACCGATTGAAATT
Locus tag: SMc02479
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: SMc02480
Name: sucC
Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: SMc02481
Name: sucD
Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
mdh-sucC-sucD -140 5 CGATCTAACCGATTGAAATT SMc02479
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