Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing sdhD gene

Properties
Regulog: PckR - Rhizobiales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Central carbohydrate metabolism
Effector:
Phylum: Proteobacteria/Alpha
Built upon 99 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Agrobacterium tumefaciens str. C58 (Cereon)
Position: -163
Score: 4.78408
Sequence: TGAACCAATCGATTAAATTC
Locus tag: Atu2645
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Atu2644
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Atu2643
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Atu2642
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
sdhC-sdhD-sdhA-sdhB -163 4.8 TGAACCAATCGATTAAATTC Atu2645
Mesorhizobium sp. BNC1
Position: -157
Score: 4.68116
Sequence: AACTTCAATCGATTCAGTCG
Locus tag: Meso_3246
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Meso_3245
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Meso_3244
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Meso_3243
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
sdhC-sdhD-sdhA-sdhB -157 4.7 AACTTCAATCGATTCAGTCG Meso_3246
Rhizobium etli CFN 42
Position: -169
Score: 4.57035
Sequence: AACCCGAATCGATTAAATTA
Locus tag: RHE_CH03897
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: RHE_CH03896
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: RHE_CH03895
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: RHE_CH03894
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
sdhC-sdhD-sdhA-sdhB -169 4.6 AACCCGAATCGATTAAATTA RHE_CH03897
Rhizobium leguminosarum bv. viciae 3841
Position: -168
Score: 4.39218
Sequence: AACGCGAATCGATTAAATTA
Locus tag: RL4446
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: RL4445
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: RL4444
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: RL4443
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
sdhC-sdhD-sdhA-sdhB -168 4.4 AACGCGAATCGATTAAATTA RL4446
Rhizobium sp. NGR234
Position: -162
Score: 4.59795
Sequence: TCGTCTAATCGATTTTATTT
Locus tag: NGR_c31370
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: NGR_c31360
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: NGR_c31350
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: NGR_c31340
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
sdhC-sdhD-sdhA-sdhB -162 4.6 TCGTCTAATCGATTTTATTT NGR_c31370
Sinorhizobium meliloti 1021
Position: -160
Score: 5.02716
Sequence: CCGTCAAATCGATTAAATTG
Locus tag: SMc02463
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: SMc02464
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: SMc02465
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: SMc02466
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
sdhC-sdhD-sdhA-sdhB -160 5 CCGTCAAATCGATTAAATTG SMc02463