Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing araC gene

Properties
Regulog: AraC - Enterobacterales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator (repressor)
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Proteobacteria
Built upon 56 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -278
Score: 8.12532
Sequence: TCAGGCAGGATCCGCTA-(4)-TATGGATTAAAATGCTA
Position: -204
Score: 8.3147
Sequence: TGTGGACATTTCTGTCG-(4)-TATAGACACTTTTGTTA
Locus tag: CKO_03318
Name: araC
Funciton: Arabinose operon regulatory protein, AraC family
araC -278 8.1 TCAGGCAGGATCCGCTA-(4)-TATGGATTAAAATGCTA CKO_03318
-204 8.3 TGTGGACATTTCTGTCG-(4)-TATAGACACTTTTGTTA
Enterobacter sp. 638
Position: -276
Score: 8.10535
Sequence: TCAGGCAGGATCCGCTA-(4)-TATGGATTAAATTGCTG
Position: -202
Score: 8.63485
Sequence: TGTGGACATTTCTGCCG-(4)-TATAGACACTTTTGTTA
Locus tag: Ent638_0611
Name: araC
Funciton: Arabinose operon regulatory protein, AraC family
araC -276 8.1 TCAGGCAGGATCCGCTA-(4)-TATGGATTAAATTGCTG Ent638_0611
-202 8.6 TGTGGACATTTCTGCCG-(4)-TATAGACACTTTTGTTA
Erwinia amylovora ATCC 49946
Position: -299
Score: 6.31618
Sequence: TTAGGTTGAGCAGGCTA-(4)-TATGTATTTTTCTGTCG
Position: -224
Score: 8.34188
Sequence: AAAGGTTAAATTTGCTG-(4)-TATGGATAAATCAGCTG
Locus tag: EAM_1698
Name: araF
Funciton: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
Locus tag: EAM_1699
Name: araG
Funciton: L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
Locus tag: EAM_1700
Name: araH
Funciton: L-arabinose transport system permease protein (TC 3.A.1.2.2)
Locus tag: EAM_1701
Name: araC
Funciton: Arabinose operon regulatory protein, AraC family
araF-araG-araH-araC -299 6.3 TTAGGTTGAGCAGGCTA-(4)-TATGTATTTTTCTGTCG EAM_1698
-224 8.3 AAAGGTTAAATTTGCTG-(4)-TATGGATAAATCAGCTG
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -310
Score: 6.42564
Sequence: TTAGGAGTGGTTAGCTA-(4)-TATGTATTTTTCTGTCG
Position: -235
Score: 7.10563
Sequence: ATTGGTTAAATTTGCTA-(4)-TATGCACAAACCTGTCA
Locus tag: ECA2273
Name: araF
Funciton: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
Locus tag: ECA2272
Name: araG
Funciton: L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
Locus tag: ECA2271
Name: araH
Funciton: L-arabinose transport system permease protein (TC 3.A.1.2.2)
Locus tag: ECA2270
Name: araC
Funciton: Arabinose operon regulatory protein, AraC family
araF-araG-araH-araC -310 6.4 TTAGGAGTGGTTAGCTA-(4)-TATGTATTTTTCTGTCG ECA2273
-235 7.1 ATTGGTTAAATTTGCTA-(4)-TATGCACAAACCTGTCA
Escherichia coli str. K-12 substr. MG1655
Position: -277
Score: 7.98029
Sequence: TCAGGTAGGATCCGCTA-(4)-TATGGATAAAAATGCTA
Position: -203
Score: 8.65678
Sequence: TGTGGACTTTTCTGCCG-(4)-TATAGACACTTTTGTTA
Locus tag: b0064
Name: araC
Funciton: Arabinose operon regulatory protein, AraC family
araC -277 8 TCAGGTAGGATCCGCTA-(4)-TATGGATAAAAATGCTA b0064
-203 8.7 TGTGGACTTTTCTGCCG-(4)-TATAGACACTTTTGTTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -277
Score: 8.46731
Sequence: TCAGGCCGGATTCGCTA-(4)-TATGGATTATTTTGCTG
Position: -203
Score: 8.65678
Sequence: TGTGGACTTTTCTGCCG-(4)-TATAGACACTTTTGTTA
Locus tag: KPN_00063
Name: araC
Funciton: Arabinose operon regulatory protein, AraC family
araC -277 8.5 TCAGGCCGGATTCGCTA-(4)-TATGGATTATTTTGCTG KPN_00063
-203 8.7 TGTGGACTTTTCTGCCG-(4)-TATAGACACTTTTGTTA
Salmonella typhimurium LT2
Position: -279
Score: 8.08342
Sequence: TCAGGCAGGATCCGCTA-(4)-TATGGACAAAAATGCTA
Position: -205
Score: 8.39881
Sequence: TGTGGACATTCCAGCCA-(4)-TATAGACACTTCTGTTA
Locus tag: STM0104
Name: araC
Funciton: Arabinose operon regulatory protein, AraC family
araC -279 8.1 TCAGGCAGGATCCGCTA-(4)-TATGGACAAAAATGCTA STM0104
-205 8.4 TGTGGACATTCCAGCCA-(4)-TATAGACACTTCTGTTA
Serratia proteamaculans 568
Position: -299
Score: 7.10382
Sequence: TGAGGAGCCGTTAGCTG-(4)-TATGCACTTTTCTGCTT
Position: -224
Score: 7.52482
Sequence: CTTGGCGGAATTCGCTA-(4)-TATGCACATATCTGCTG
Locus tag: Spro_2245
Name: araF
Funciton: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
Locus tag: Spro_2246
Name: araG
Funciton: L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
Locus tag: Spro_2247
Name: araH
Funciton: L-arabinose transport system permease protein (TC 3.A.1.2.2)
Locus tag: Spro_2248
Name: araC
Funciton: Arabinose operon regulatory protein, AraC family
araF-araG-araH-araC -299 7.1 TGAGGAGCCGTTAGCTG-(4)-TATGCACTTTTCTGCTT Spro_2245
-224 7.5 CTTGGCGGAATTCGCTA-(4)-TATGCACATATCTGCTG
Yersinia pestis KIM
Position: -331
Score: 7.50937
Sequence: TGAGGAGCCAATAGCTG-(4)-TATGCACTTTTCTGCTT
Position: -256
Score: 7.8161
Sequence: CGAGGTTAAATTTGCTG-(4)-TATGGATAAATAAACTG
Locus tag: y2096
Name: araF
Funciton: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
Locus tag: y2097
Name: araG
Funciton: L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
Locus tag: y2098
Name: araH
Funciton: L-arabinose transport system permease protein (TC 3.A.1.2.2)
Locus tag: y2100
Name: araC
Funciton: Arabinose operon regulatory protein, AraC family
araF-araG-araH-araC -331 7.5 TGAGGAGCCAATAGCTG-(4)-TATGCACTTTTCTGCTT y2096
-256 7.8 CGAGGTTAAATTTGCTG-(4)-TATGGATAAATAAACTG
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