Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing araH gene

Properties
Regulog: AraC - Enterobacterales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator (repressor)
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Proteobacteria
Built upon 56 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -284
Score: 8.34719
Sequence: CAAGGATTTGCTGGCTG-(4)-TATGGACTAATCTGCTA
Position: -231
Score: 6.27076
Sequence: TCTGACAAAACCTTCTT-(4)-TATGTCATTTTCCGCTG
Position: -210
Score: 7.14451
Sequence: TATGTCATTTTCCGCTG-(4)-TATGTACGCAATTACTG
Locus tag: CKO_01050
Name: araF
Funciton: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
Locus tag: CKO_01051
Name: araG
Funciton: L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
Locus tag: CKO_01052
Name: araH
Funciton: L-arabinose transport system permease protein (TC 3.A.1.2.2)
araF-araG-araH -284 8.3 CAAGGATTTGCTGGCTG-(4)-TATGGACTAATCTGCTA CKO_01050
-231 6.3 TCTGACAAAACCTTCTT-(4)-TATGTCATTTTCCGCTG
-210 7.1 TATGTCATTTTCCGCTG-(4)-TATGTACGCAATTACTG
Enterobacter sp. 638
Position: -283
Score: 7.55376
Sequence: CAGGGACTTCTTAGCTG-(4)-TATGGATAATCTTGCTT
Position: -208
Score: 7.05695
Sequence: TATGTCATTTCTCGCTG-(4)-TATGCACGCAATTACTG
Locus tag: Ent638_2476
Name: araF
Funciton: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
Locus tag: Ent638_2475
Name: araG
Funciton: L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
Locus tag: Ent638_2474
Name: araH
Funciton: L-arabinose transport system permease protein (TC 3.A.1.2.2)
araF-araG-araH -283 7.6 CAGGGACTTCTTAGCTG-(4)-TATGGATAATCTTGCTT Ent638_2476
-208 7.1 TATGTCATTTCTCGCTG-(4)-TATGCACGCAATTACTG
Erwinia amylovora ATCC 49946
Position: -299
Score: 6.31618
Sequence: TTAGGTTGAGCAGGCTA-(4)-TATGTATTTTTCTGTCG
Position: -224
Score: 8.34188
Sequence: AAAGGTTAAATTTGCTG-(4)-TATGGATAAATCAGCTG
Locus tag: EAM_1698
Name: araF
Funciton: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
Locus tag: EAM_1699
Name: araG
Funciton: L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
Locus tag: EAM_1700
Name: araH
Funciton: L-arabinose transport system permease protein (TC 3.A.1.2.2)
Locus tag: EAM_1701
Name: araC
Funciton: Arabinose operon regulatory protein, AraC family
araF-araG-araH-araC -299 6.3 TTAGGTTGAGCAGGCTA-(4)-TATGTATTTTTCTGTCG EAM_1698
-224 8.3 AAAGGTTAAATTTGCTG-(4)-TATGGATAAATCAGCTG
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -310
Score: 6.42564
Sequence: TTAGGAGTGGTTAGCTA-(4)-TATGTATTTTTCTGTCG
Position: -235
Score: 7.10563
Sequence: ATTGGTTAAATTTGCTA-(4)-TATGCACAAACCTGTCA
Locus tag: ECA2273
Name: araF
Funciton: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
Locus tag: ECA2272
Name: araG
Funciton: L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
Locus tag: ECA2271
Name: araH
Funciton: L-arabinose transport system permease protein (TC 3.A.1.2.2)
Locus tag: ECA2270
Name: araC
Funciton: Arabinose operon regulatory protein, AraC family
araF-araG-araH-araC -310 6.4 TTAGGAGTGGTTAGCTA-(4)-TATGTATTTTTCTGTCG ECA2273
-235 7.1 ATTGGTTAAATTTGCTA-(4)-TATGCACAAACCTGTCA
Escherichia coli str. K-12 substr. MG1655
Position: -284
Score: 8.55983
Sequence: CAAGGATTTCCAGGCTA-(4)-TATGGATTAATCTGCTG
Position: -209
Score: 7.605
Sequence: TATGTCTTTTCCCGCTA-(4)-TATGCACGTTCTCACTG
Locus tag: b1901
Name: araF
Funciton: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
Locus tag: b1900
Name: araG
Funciton: L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
Locus tag: b4460
Name: araH
Funciton: L-arabinose transport system permease protein (TC 3.A.1.2.2)
araF-araG-araH -284 8.6 CAAGGATTTCCAGGCTA-(4)-TATGGATTAATCTGCTG b1901
-209 7.6 TATGTCTTTTCCCGCTA-(4)-TATGCACGTTCTCACTG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -282
Score: 8.25686
Sequence: CAAGGATAAGCCTGCTG-(4)-TATAGATGATCCTGCTA
Position: -207
Score: 7.16448
Sequence: TATGTCATTTTTTGCTA-(4)-TATGTACGCAATTACTG
Locus tag: KPN_02396
Name: araF
Funciton: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
Locus tag: KPN_02395
Name: araG
Funciton: L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
Locus tag: KPN_02394
Name: araH
Funciton: L-arabinose transport system permease protein (TC 3.A.1.2.2)
araF-araG-araH -282 8.3 CAAGGATAAGCCTGCTG-(4)-TATAGATGATCCTGCTA KPN_02396
-207 7.2 TATGTCATTTTTTGCTA-(4)-TATGTACGCAATTACTG
Serratia proteamaculans 568
Position: -299
Score: 7.10382
Sequence: TGAGGAGCCGTTAGCTG-(4)-TATGCACTTTTCTGCTT
Position: -224
Score: 7.52482
Sequence: CTTGGCGGAATTCGCTA-(4)-TATGCACATATCTGCTG
Locus tag: Spro_2245
Name: araF
Funciton: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
Locus tag: Spro_2246
Name: araG
Funciton: L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
Locus tag: Spro_2247
Name: araH
Funciton: L-arabinose transport system permease protein (TC 3.A.1.2.2)
Locus tag: Spro_2248
Name: araC
Funciton: Arabinose operon regulatory protein, AraC family
araF-araG-araH-araC -299 7.1 TGAGGAGCCGTTAGCTG-(4)-TATGCACTTTTCTGCTT Spro_2245
-224 7.5 CTTGGCGGAATTCGCTA-(4)-TATGCACATATCTGCTG
Yersinia pestis KIM
Position: -331
Score: 7.50937
Sequence: TGAGGAGCCAATAGCTG-(4)-TATGCACTTTTCTGCTT
Position: -256
Score: 7.8161
Sequence: CGAGGTTAAATTTGCTG-(4)-TATGGATAAATAAACTG
Locus tag: y2096
Name: araF
Funciton: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
Locus tag: y2097
Name: araG
Funciton: L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
Locus tag: y2098
Name: araH
Funciton: L-arabinose transport system permease protein (TC 3.A.1.2.2)
Locus tag: y2100
Name: araC
Funciton: Arabinose operon regulatory protein, AraC family
araF-araG-araH-araC -331 7.5 TGAGGAGCCAATAGCTG-(4)-TATGCACTTTTCTGCTT y2096
-256 7.8 CGAGGTTAAATTTGCTG-(4)-TATGGATAAATAAACTG
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