Orthologous regulated operons containing nrfD gene

Properties
Regulog:	Fur - Vibrionales
Regulator type:	Transcription factor
Regulator family:	FUR
Regulation mode:	repressor (activator)
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Phylum:	Proteobacteria/Gamma

Built upon 447 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -208 Score: 4.75395 Sequence: TAATGAGAATGGGTGTCAATT Position: -191 Score: 5.09667 Sequence: AATTGCAAATGGTTTTTATTT Locus tag: PBPRA1259 Name: nrfB Funciton: Cytochrome c-type protein NrfB precursor Locus tag: PBPRA1260 Name: nfrC Funciton: Putative nitrite reductase, Fe-S protein (NrfC) Locus tag: PBPRA1261 Name: nrfD Funciton: Putative nitrate reductase, formate dependent (NrfD)
nrfB-nfrC-nrfD	-208	4.8	TAATGAGAATGGGTGTCAATT	PBPRA1259
	-191	5.1	AATTGCAAATGGTTTTTATTT
Vibrio fischeri ES114
Position: -264 Score: 5.5546 Sequence: TATTAAGAATGATTCTTATTT Locus tag: VF_1553 Name: nrfB Funciton: Cytochrome c-type protein NrfB precursor Locus tag: VF_1552 Name: nfrC Funciton: Putative nitrite reductase, Fe-S protein (NrfC) Locus tag: VF_1551 Name: nrfD Funciton: Putative nitrate reductase, formate dependent (NrfD)
nrfB-nfrC-nrfD	-264	5.6	TATTAAGAATGATTCTTATTT	VF_1553
Vibrio harveyi ATCC BAA-1116
Position: -118 Score: 5.24875 Sequence: AAATAAGAATTGATGTCATTT Position: -46 Score: 5.88896 Sequence: AATTGAGAATAGTTATCAATT Locus tag: VIBHAR_02726 Name: nrfB Funciton: Cytochrome c-type protein NrfB precursor Locus tag: VIBHAR_02725 Name: nfrC Funciton: Putative nitrite reductase, Fe-S protein (NrfC) Locus tag: VIBHAR_02724 Name: nfrC Funciton: Putative nitrite reductase, Fe-S protein (NrfC) Locus tag: VIBHAR_02723 Name: nrfD Funciton: Putative nitrate reductase, formate dependent (NrfD)
nrfB-nfrC-nfrC-nrfD	-118	5.2	AAATAAGAATTGATGTCATTT	VIBHAR_02726
	-46	5.9	AATTGAGAATAGTTATCAATT
Vibrio parahaemolyticus RIMD 2210633
Position: -140 Score: 5.24875 Sequence: AAATAAGAATTGATGTCATTT Position: -70 Score: 5.31152 Sequence: AGTTGAGAACAGTTATCAATT Locus tag: VP1928 Name: nrfB Funciton: Cytochrome c-type protein NrfB precursor Locus tag: VP1927 Name: nfrC Funciton: Putative nitrite reductase, Fe-S protein (NrfC) Locus tag: VP1926 Name: nrfD Funciton: Putative nitrate reductase, formate dependent (NrfD)
nrfB-nfrC-nrfD	-140	5.2	AAATAAGAATTGATGTCATTT	VP1928
	-70	5.3	AGTTGAGAACAGTTATCAATT
Vibrio salmonicida LFI1238
Position: -286 Score: 5.4635 Sequence: TATTAATAATGGTTCTTATTT Position: -127 Score: 4.48097 Sequence: CAATGAGAATTGATTTCAATG Locus tag: VSAL_I1998 Name: nrfB Funciton: Cytochrome c-type protein NrfB precursor Locus tag: VSAL_I1999 Name: nfrC Funciton: Putative nitrite reductase, Fe-S protein (NrfC) Locus tag: VSAL_I2000 Name: nrfD Funciton: Putative nitrate reductase, formate dependent (NrfD)
nrfB-nfrC-nrfD	-286	5.5	TATTAATAATGGTTCTTATTT	VSAL_I1998
	-127	4.5	CAATGAGAATTGATTTCAATG
Vibrio shilonii AK1
Position: -274 Score: 5.71943 Sequence: TGATGATATTAATTATCATTT Position: -125 Score: 4.88862 Sequence: AAATAAGAATTGATTACATTT Locus tag: VSAK1_05595 Name: nrfB Funciton: Cytochrome c-type protein NrfB precursor Locus tag: VSAK1_05590 Name: nfrC Funciton: Putative nitrite reductase, Fe-S protein (NrfC) Locus tag: VSAK1_05585 Name: nrfD Funciton: Putative nitrate reductase, formate dependent (NrfD)
nrfB-nfrC-nrfD	-274	5.7	TGATGATATTAATTATCATTT	VSAK1_05595
	-125	4.9	AAATAAGAATTGATTACATTT
Vibrio splendidus LGP32
Position: -263 Score: 5.40717 Sequence: AACTGAGAATTATTATCATAT Position: -113 Score: 5.73282 Sequence: AAATAAGAATTGATATCATTT Locus tag: VS_1932 Name: nrfB Funciton: Cytochrome c-type protein NrfB precursor Locus tag: VS_1931 Name: nfrC Funciton: Putative nitrite reductase, Fe-S protein (NrfC) Locus tag: VS_1930 Name: nrfD Funciton: Putative nitrate reductase, formate dependent (NrfD)
nrfB-nfrC-nrfD	-263	5.4	AACTGAGAATTATTATCATAT	VS_1932
	-113	5.7	AAATAAGAATTGATATCATTT
Vibrio vulnificus CMCP6
Position: -144 Score: 5.24875 Sequence: AAATAAGAATTGATGTCATTT Position: -76 Score: 5.5451 Sequence: AATTGAAAATGATTCTTAATT Locus tag: VV1_3034 Name: nrfB Funciton: Cytochrome c-type protein NrfB precursor Locus tag: VV1_3033 Name: nfrC Funciton: Putative nitrite reductase, Fe-S protein (NrfC) Locus tag: VV1_3032 Name: nrfD Funciton: Putative nitrate reductase, formate dependent (NrfD)
nrfB-nfrC-nrfD	-144	5.2	AAATAAGAATTGATGTCATTT	VV1_3034
	-76	5.5	AATTGAAAATGATTCTTAATT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Orthologous regulated operons containing nrfD gene

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --