Orthologous regulated operons containing rhiN3 gene
| Regulog: | HTCS_Rgu-2 - Bacteroidaceae |
| Regulator type: | Transcription factor |
| Regulator family: | [Other] |
| Regulation mode: | activator |
| Biological process: | Rhamnogalacturonides utilization |
| Effector: | |
| Phylum: | Bacteroidetes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Bacteroides dorei DSM 17855 | ||||
|
Position: -85
Score: 9.26695 Sequence: TGGACGAATTTCCA-(6)-TGTATCTTATTCTA
Locus tag: BACDOR_00405
Name: BT2958 Funciton: Putative glycosil hydrolase, GH115 family
Locus tag: BACDOR_00406
Name: pehX5 Funciton: Polygalacturonase (EC 3.2.1.15)
Locus tag: BACDOR_00407
Name: BT4175 Funciton: Predicted beta-galactosidase, PL11 family
Locus tag: BACDOR_00408
Name: rhiN3 Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
Locus tag: BACDOR_00409
Name: rhaU Funciton: L-rhamnose mutarotase
Locus tag: BACDOR_00410
Name: HTCS_Rgu-2 Funciton: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family |
||||
| BT2958-pehX5-BT4175-rhiN3-rhaU-HTCS_Rgu-2 | -85 | 9.3 | TGGACGAATTTCCA-(6)-TGTATCTTATTCTA | BACDOR_00405 |
| Bacteroides ovatus ATCC 8483 | ||||
|
Position: -93
Score: 8.33037 Sequence: TGATGATTTCTACA-(6)-TGTACAATATTCTA
Locus tag: BACOVA_04974
Name: BT4175 Funciton: Predicted beta-galactosidase, PL11 family
Locus tag: BACOVA_04975
Name: rhiN3 Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
Locus tag: BACOVA_04976
Name: rhaU Funciton: L-rhamnose mutarotase
Locus tag: BACOVA_04977
Name: HTCS_Rgu-2 Funciton: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family |
||||
| BT4175-rhiN3-rhaU-HTCS_Rgu-2 | -93 | 8.3 | TGATGATTTCTACA-(6)-TGTACAATATTCTA | BACOVA_04974 |
| Bacteroides plebeius DSM 17135 | ||||
|
Position: -96
Score: 8.58625 Sequence: TGTATGATAATCGA-(6)-TGTATAATAATCCA
Locus tag: BACPLE_00253
Name: BT4147 Funciton: Conserved hypothetical protein
Locus tag: BACPLE_00254
Name: pehX2 Funciton: Predicted endopolygalacturonase
Locus tag: BACPLE_00255
Name: BT4175 Funciton: Predicted beta-galactosidase, PL11 family
Locus tag: BACPLE_00256
Name: rhiN3 Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) |
||||
| BT4147-pehX2-BT4175-rhiN3 | -96 | 8.6 | TGTATGATAATCGA-(6)-TGTATAATAATCCA | BACPLE_00253 |
| Bacteroides thetaiotaomicron VPI-5482 | ||||
|
Position: -183
Score: 6.48899 Sequence: TGGAATATTGTCCA-(6)-TTTAAATTTGTCCA
Locus tag: BT4175
Name: BT4175 Funciton: Predicted beta-galactosidase, PL11 family
Locus tag: BT4176
Name: rhiN3 Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
Locus tag: BT4177
Name: rhaU Funciton: L-rhamnose mutarotase
Locus tag: BT4178
Name: HTCS_Rgu-2 Funciton: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family |
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| BT4175-rhiN3-rhaU-HTCS_Rgu-2 | -183 | 6.5 | TGGAATATTGTCCA-(6)-TTTAAATTTGTCCA | BT4175 |
| Bacteroides vulgatus ATCC 8482 | ||||
|
Position: -85
Score: 9.26695 Sequence: TGGACGAATTTCCA-(6)-TGTATCTTATTCTA
Locus tag: BVU_0154
Name: BT2958 Funciton: Putative glycosil hydrolase, GH115 family
Locus tag: BVU_0153
Name: pehX5 Funciton: Polygalacturonase (EC 3.2.1.15)
Locus tag: BVU_0152
Name: BT4175 Funciton: Predicted beta-galactosidase, PL11 family
Locus tag: BVU_0151
Name: rhiN3 Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
Locus tag: BVU_0150
Name: rhaU Funciton: L-rhamnose mutarotase
Locus tag: BVU_0149
Name: HTCS_Rgu-2 Funciton: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family |
||||
| BT2958-pehX5-BT4175-rhiN3-rhaU-HTCS_Rgu-2 | -85 | 9.3 | TGGACGAATTTCCA-(6)-TGTATCTTATTCTA | BVU_0154 |