Orthologous regulated operons containing abnC gene

Properties
Regulog:	HTCS_Rgu-2 - Bacteroidaceae
Regulator type:	Transcription factor
Regulator family:	[Other]
Regulation mode:	activator
Biological process:	Rhamnogalacturonides utilization
Effector:
Phylum:	Bacteroidetes

Built upon 39 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Bacteroides ovatus ATCC 8483
Position: -108 Score: 8.73658 Sequence: TGTACAAAACTACA-(6)-TGAAATATTGTCCA Locus tag: BACOVA_04951 Name: BVU_0180 Funciton: Predicted arabinosidase, GH42 family Locus tag: BACOVA_04952 Name: abnC Funciton: Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99) Locus tag: BACOVA_04953 Name: BACOVA_04953 Funciton: Hypothetical protein Locus tag: BACOVA_04954 Name: pehX5 Funciton: Polygalacturonase (EC 3.2.1.15)
BVU_0180-abnC-BACOVA_04953-pehX5	-108	8.7	TGTACAAAACTACA-(6)-TGAAATATTGTCCA	BACOVA_04951
Bacteroides thetaiotaomicron VPI-5482
Position: -128 Score: 8.19823 Sequence: TGTACGAAACTACA-(6)-TGATAATATCTCCA Locus tag: BT4152 Name: abnC Funciton: Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99) Locus tag: BT4153 Name: pehX4 Funciton: Polygalacturonase (EC 3.2.1.15 ) Locus tag: BT4154 Name: BT4154 Funciton: Putative deacytylase Locus tag: BT4155 Name: pehX5 Funciton: Polygalacturonase (EC 3.2.1.15)
abnC-pehX4-BT4154-pehX5	-128	8.2	TGTACGAAACTACA-(6)-TGATAATATCTCCA	BT4152

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --