Orthologous regulated operons containing rgaE2 gene

Properties
Regulog:	HTCS_Rgu-2 - Bacteroidaceae
Regulator type:	Transcription factor
Regulator family:	[Other]
Regulation mode:	activator
Biological process:	Rhamnogalacturonides utilization
Effector:
Phylum:	Bacteroidetes

Built upon 39 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Bacteroides dorei DSM 17855
Position: -88 Score: 9.61917 Sequence: TGAACAATATTCCA-(6)-TGAATAAAATTCCA Locus tag: BACDOR_00375 Name: ramA Funciton: Alfa-L-rhamnosidase (EC 3.2.1.40) Locus tag: BACDOR_00374 Name: BVU_0175 Funciton: Predicted methylesterase Locus tag: BACDOR_00373 Name: rgaE2 Funciton: Rhamnogalacturonan endolyase Locus tag: BACDOR_00372 Name: BVU_0177 Funciton: Predicted alpha-L-rhamnosidase, GH28 family
ramA-BVU_0175-rgaE2-BVU_0177	-88	9.6	TGAACAATATTCCA-(6)-TGAATAAAATTCCA	BACDOR_00375
Bacteroides vulgatus ATCC 8482
Position: -88 Score: 9.61917 Sequence: TGAACAATATTCCA-(6)-TGAATAAAATTCCA Locus tag: BVU_0174 Name: ramA Funciton: Alfa-L-rhamnosidase (EC 3.2.1.40) Locus tag: BVU_0175 Name: BVU_0175 Funciton: Predicted methylesterase Locus tag: BVU_0176 Name: rgaE2 Funciton: Rhamnogalacturonan endolyase Locus tag: BVU_0177 Name: BVU_0177 Funciton: Predicted alpha-L-rhamnosidase, GH28 family
ramA-BVU_0175-rgaE2-BVU_0177	-88	9.6	TGAACAATATTCCA-(6)-TGAATAAAATTCCA	BVU_0174

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --