Orthologous regulated operons containing plyC2 gene

Properties
Regulog:	HTCS_Rgu-1 - Bacteroidaceae
Regulator type:	Transcription factor
Regulator family:	[Other]
Regulation mode:	activator
Biological process:	Rhamnogalacturonides utilization
Effector:	Rhamogalacturonate oligosaccharides; Galacturonate oligosaccharides
Phylum:	Bacteroidetes

Built upon 26 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Bacteroides thetaiotaomicron VPI-5482
Position: -221 Score: 8.30822 Sequence: AAAATAGTGCAC-(9)-CAAAAAGTCCCC Locus tag: BT4119 Name: plyC2 Funciton: Pectate lyase C Locus tag: BT4120 Name: BT4120 Funciton: Predicted pectin lyase Locus tag: BT4121 Name: susC_Rgu-2 Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides Locus tag: BT4122 Name: susD_Rgu-2 Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides Locus tag: BT4123 Name: pehX1 Funciton: Polygalacturonase (EC 3.2.1.15 )
plyC2-BT4120-susC_Rgu-2-susD_Rgu-2-pehX1	-221	8.3	AAAATAGTGCAC-(9)-CAAAAAGTCCCC	BT4119

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --