Orthologous regulated operons containing pemB gene

Properties
Regulog:	HTCS_Rgu-1 - Bacteroidaceae
Regulator type:	Transcription factor
Regulator family:	[Other]
Regulation mode:	activator
Biological process:	Rhamnogalacturonides utilization
Effector:	Rhamogalacturonate oligosaccharides; Galacturonate oligosaccharides
Phylum:	Bacteroidetes

Built upon 26 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Bacteroides dorei DSM 17855
Position: -106 Score: 8.85205 Sequence: TAAAATATACGA-(9)-CAAATATTACAA Locus tag: BACDOR_03257 Name: plyC4 Funciton: Pectate lyase C Locus tag: BACDOR_03256 Name: ytaP Funciton: Predicted hydrolase Locus tag: BACDOR_03255 Name: pemB Funciton: Pectinesterase (EC 3.1.1.11)
plyC4-ytaP-pemB	-106	8.9	TAAAATATACGA-(9)-CAAATATTACAA	BACDOR_03257
Bacteroides plebeius DSM 17135
Position: -108 Score: 7.72838 Sequence: CAATTTTTATAC-(9)-TGAAAACTACAC Locus tag: BACPLE_03451 Name: rhiN Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) Locus tag: BACPLE_03450 Name: pemB Funciton: Pectinesterase (EC 3.1.1.11) Locus tag: BACPLE_03449 Name: BACCELL_03124 Funciton: Predicted deacetylase
rhiN-pemB-BACCELL_03124	-108	7.7	CAATTTTTATAC-(9)-TGAAAACTACAC	BACPLE_03451
Bacteroides thetaiotaomicron VPI-5482
Position: -105 Score: 9.08411 Sequence: CAAAAAATACAC-(9)-TAAAAAATCCCA Locus tag: BT4108 Name: rhiN Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) Locus tag: BT4109 Name: rgaE Funciton: Rhamnogalacturonan acetylesterase (EC 3.1.1.86) Locus tag: BT4110 Name: pemB Funciton: Pectinesterase (EC 3.1.1.11)
rhiN-rgaE-pemB	-105	9.1	CAAAAAATACAC-(9)-TAAAAAATCCCA	BT4108
Bacteroides vulgatus ATCC 8482
Position: -106 Score: 8.85205 Sequence: TAAAATATACGA-(9)-CAAATATTACAA Locus tag: BVU_1813 Name: plyC4 Funciton: Pectate lyase C Locus tag: BVU_1814 Name: ytaP Funciton: Predicted hydrolase Locus tag: BVU_1815 Name: pemB Funciton: Pectinesterase (EC 3.1.1.11)
plyC4-ytaP-pemB	-106	8.9	TAAAATATACGA-(9)-CAAATATTACAA	BVU_1813