Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing PF01476 gene

Properties
Regulog: LexA - Clostridia-3
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Firmicutes
Built upon 102 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacteroides pectinophilus ATCC 43243
Position: -115
Score: 4.66647
Sequence: CAGAAAATTTGTTCGG
Position: -77
Score: 4.92541
Sequence: ACAAACGAATGTTTGA
Locus tag: BACPEC_00340
Name: PF01476
Funciton: Peptidoglycan-binding lysin domain
PF01476 -115 4.7 CAGAAAATTTGTTCGG BACPEC_00340
-77 4.9 ACAAACGAATGTTTGA
Bryantella formatexigens DSM 14469
Position: -186
Score: 4.98282
Sequence: TCGAAAATTTGTTCGA
Position: -160
Score: 4.84352
Sequence: ACAAACATCTGTTCTG
Locus tag: BRYFOR_04038
Name: PF01476
Funciton: Peptidoglycan-binding lysin domain
PF01476 -186 5 TCGAAAATTTGTTCGA BRYFOR_04038
-160 4.8 ACAAACATCTGTTCTG
Clostridium bolteae ATCC BAA-613
Position: -160
Score: 5.10191
Sequence: ACAAACATTTGTTCTG
Position: -122
Score: 4.53385
Sequence: AAGAACAGACGTTCTG
Locus tag: CLOBOL_03827
Name: PF01476
Funciton: Peptidoglycan-binding lysin domain
PF01476 -160 5.1 ACAAACATTTGTTCTG CLOBOL_03827
-122 4.5 AAGAACAGACGTTCTG
Clostridium nexile DSM 1787
Position: -126
Score: 4.99858
Sequence: TAGAAAATATGTTCGT
Position: -90
Score: 5.23044
Sequence: ACAAACATTTGTTCTT
Position: -57
Score: 4.86301
Sequence: AAGAACAGTTGTTCGG
Locus tag: CLONEX_01663
Name: PF01476
Funciton: Peptidoglycan-binding lysin domain
PF01476 -126 5 TAGAAAATATGTTCGT CLONEX_01663
-90 5.2 ACAAACATTTGTTCTT
-57 4.9 AAGAACAGTTGTTCGG
Clostridium scindens ATCC 35704
Position: -141
Score: 4.92344
Sequence: TAGAAAATATGTTCGA
Position: -104
Score: 4.76021
Sequence: ACAAACATGCGTTCGA
Position: -56
Score: 4.82284
Sequence: ACAAACAAATGTTTTC
Locus tag: CLOSCI_00492
Name: PF01476
Funciton: Peptidoglycan-binding lysin domain
PF01476 -141 4.9 TAGAAAATATGTTCGA CLOSCI_00492
-104 4.8 ACAAACATGCGTTCGA
-56 4.8 ACAAACAAATGTTTTC
Eubacterium rectale ATCC 33656
Position: -75
Score: 4.7061
Sequence: CCGAAATTTTGTTCGT
Position: -49
Score: 4.94491
Sequence: ACAAACGATTGTTCGA
Position: -8
Score: 4.97661
Sequence: ACAAACACATGTTCGG
Locus tag: EUBREC_1702
Name: PF01476
Funciton: Peptidoglycan-binding lysin domain
PF01476 -75 4.7 CCGAAATTTTGTTCGT EUBREC_1702
-49 4.9 ACAAACGATTGTTCGA
-8 5 ACAAACACATGTTCGG
Ruminococcus gnavus ATCC 29149
Position: -89
Score: 4.98232
Sequence: ACAAACATACGTTCTG
Position: -51
Score: 5.07096
Sequence: AAGAACGTATGTTCTT
Locus tag: RUMGNA_01921
Name: PF01476
Funciton: Peptidoglycan-binding lysin domain
PF01476 -89 5 ACAAACATACGTTCTG RUMGNA_01921
-51 5.1 AAGAACGTATGTTCTT
Ruminococcus lactaris ATCC 29176
Position: -118
Score: 4.97023
Sequence: GCGAAAATATGTTCGA
Position: -81
Score: 5.05309
Sequence: ACAAACATCTGTTCGG
Position: -40
Score: 4.53198
Sequence: ATGAACATACGTTCTC
Locus tag: RUMLAC_00444
Name: PF01476
Funciton: Peptidoglycan-binding lysin domain
PF01476 -118 5 GCGAAAATATGTTCGA RUMLAC_00444
-81 5.1 ACAAACATCTGTTCGG
-40 4.5 ATGAACATACGTTCTC
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