Orthologous regulated operons containing rhaB gene
| Regulog: | RhaR - Chloroflexia |
| Regulator type: | Transcription factor |
| Regulator family: | DeoR |
| Regulation mode: | repressor |
| Biological process: | Rhamnose utilization |
| Effector: | Rhamnose |
| Phylum: | Chloroflexi |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Chloroflexus aggregans DSM 9485 | ||||
|
Position: -140
Score: 7.21639 Sequence: TCGTAA-(4)-TCGAAA
Position: -130
Score: 6.93323 Sequence: TCGAAA-(4)-TTGACA
Position: -120
Score: 6.65008 Sequence: TTGACA-(4)-TTGAAA
Locus tag: Cagg_3309
Name: rhaR Funciton: Transcriptional regulator of rhamnose utilization, DeoR family
Locus tag: Cagg_3310
Name: rhaG Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component
Locus tag: Cagg_3311
Name: rhaH Funciton: L-rhamnose ABC transporter, permease component 1
Locus tag: Cagg_3312
Name: rhaJ Funciton: L-rhamnose ABC transporter, permease component 2
Locus tag: Cagg_3313
Name: rhaF Funciton: L-rhamnose ABC transporter, duplicated periplasmic rhamnose-binding protein
Locus tag: Cagg_3314
Name: rhaM Funciton: L-rhamnose mutarotase
Locus tag: Cagg_3315
Name: rhaA Funciton: L-rhamnose isomerase (EC 5.3.1.14)
Locus tag: Cagg_3316
Name: rhaEW Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22)
Locus tag: Cagg_3317
Name: rhaB Funciton: Rhamnulokinase (EC 2.7.1.5) |
||||
| rhaR-rhaG-rhaH-rhaJ-rhaF-rhaM-rhaA-rhaEW-rhaB | -140 | 7.2 | TCGTAA-(4)-TCGAAA | Cagg_3309 |
| -130 | 6.9 | TCGAAA-(4)-TTGACA | ||
| -120 | 6.7 | TTGACA-(4)-TTGAAA | ||
| Chloroflexus sp. Y-400-fl | ||||
|
Position: -91
Score: 6.79033 Sequence: TCGTAA-(4)-TCGTAA
Position: -81
Score: 6.50717 Sequence: TCGTAA-(4)-TTGACA
Position: -71
Score: 6.65008 Sequence: TTGACA-(4)-TTGAAA
Locus tag: Chy400_2467
Name: rhaR Funciton: Transcriptional regulator of rhamnose utilization, DeoR family
Locus tag: Chy400_2466
Name: rhaG Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component
Locus tag: Chy400_2465
Name: rhaH Funciton: L-rhamnose ABC transporter, permease component 1
Locus tag: Chy400_2464
Name: rhaJ Funciton: L-rhamnose ABC transporter, permease component 2
Locus tag: Chy400_2463
Name: rhaF Funciton: L-rhamnose ABC transporter, duplicated periplasmic rhamnose-binding protein
Locus tag: Chy400_2462
Name: rhaM Funciton: L-rhamnose mutarotase
Locus tag: Chy400_2461
Name: rhaA Funciton: L-rhamnose isomerase (EC 5.3.1.14)
Locus tag: Chy400_2460
Name: rhaEW Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22)
Locus tag: Chy400_2459
Name: rhaB Funciton: Rhamnulokinase (EC 2.7.1.5) |
||||
| rhaR-rhaG-rhaH-rhaJ-rhaF-rhaM-rhaA-rhaEW-rhaB | -91 | 6.8 | TCGTAA-(4)-TCGTAA | Chy400_2467 |
| -81 | 6.5 | TCGTAA-(4)-TTGACA | ||
| -71 | 6.7 | TTGACA-(4)-TTGAAA | ||
| Roseiflexus castenholzii DSM 13941 | ||||
|
Position: -78
Score: 7.02131 Sequence: TCGAAA-(4)-CCGAAA
Position: -68
Score: 6.31209 Sequence: CCGAAA-(4)-TTGACA
Position: -58
Score: 6.93323 Sequence: TTGACA-(4)-TCGAAA
Locus tag: Rcas_3457
Name: rhaR Funciton: Transcriptional regulator of rhamnose utilization, DeoR family
Locus tag: Rcas_3456
Name: rhaM Funciton: L-rhamnose mutarotase
Locus tag: Rcas_3455
Name: rhaA Funciton: L-rhamnose isomerase (EC 5.3.1.14)
Locus tag: Rcas_3454
Name: rhaEW Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22)
Locus tag: Rcas_3453
Name: rhaB Funciton: Rhamnulokinase (EC 2.7.1.5) |
||||
| rhaR-rhaM-rhaA-rhaEW-rhaB | -78 | 7 | TCGAAA-(4)-CCGAAA | Rcas_3457 |
| -68 | 6.3 | CCGAAA-(4)-TTGACA | ||
| -58 | 6.9 | TTGACA-(4)-TCGAAA | ||
| Roseiflexus sp. RS-1 | ||||
|
Position: -94
Score: 7.64245 Sequence: TCGAAA-(4)-TCGAAA
Position: -84
Score: 6.93323 Sequence: TCGAAA-(4)-TTGACA
Position: -74
Score: 6.93323 Sequence: TTGACA-(4)-TCGAAA
Locus tag: RoseRS_2724
Name: rhaR Funciton: Transcriptional regulator of rhamnose utilization, DeoR family
Locus tag: RoseRS_2725
Name: rhaG Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component
Locus tag: RoseRS_2726
Name: rhaH Funciton: L-rhamnose ABC transporter, permease component 1
Locus tag: RoseRS_2727
Name: rhaJ Funciton: L-rhamnose ABC transporter, permease component 2
Locus tag: RoseRS_2729
Name: rhaM Funciton: L-rhamnose mutarotase
Locus tag: RoseRS_2730
Name: rhaA Funciton: L-rhamnose isomerase (EC 5.3.1.14)
Locus tag: RoseRS_2731
Name: rhaEW Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22)
Locus tag: RoseRS_2732
Name: rhaB Funciton: Rhamnulokinase (EC 2.7.1.5) |
||||
| rhaR-rhaG-rhaH-rhaJ-rhaM-rhaA-rhaEW-rhaB | -94 | 7.6 | TCGAAA-(4)-TCGAAA | RoseRS_2724 |
| -84 | 6.9 | TCGAAA-(4)-TTGACA | ||
| -74 | 6.9 | TTGACA-(4)-TCGAAA | ||