Orthologous regulated operons containing rhaJ gene

Properties
Regulog:	RhaR - Chloroflexia
Regulator type:	Transcription factor
Regulator family:	DeoR
Regulation mode:	repressor
Biological process:	Rhamnose utilization
Effector:	Rhamnose
Phylum:	Chloroflexi

Built upon 12 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Chloroflexus aggregans DSM 9485
Position: -140 Score: 7.21639 Sequence: TCGTAA-(4)-TCGAAA Position: -130 Score: 6.93323 Sequence: TCGAAA-(4)-TTGACA Position: -120 Score: 6.65008 Sequence: TTGACA-(4)-TTGAAA Locus tag: Cagg_3309 Name: rhaR Funciton: Transcriptional regulator of rhamnose utilization, DeoR family Locus tag: Cagg_3310 Name: rhaG Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component Locus tag: Cagg_3311 Name: rhaH Funciton: L-rhamnose ABC transporter, permease component 1 Locus tag: Cagg_3312 Name: rhaJ Funciton: L-rhamnose ABC transporter, permease component 2 Locus tag: Cagg_3313 Name: rhaF Funciton: L-rhamnose ABC transporter, duplicated periplasmic rhamnose-binding protein Locus tag: Cagg_3314 Name: rhaM Funciton: L-rhamnose mutarotase Locus tag: Cagg_3315 Name: rhaA Funciton: L-rhamnose isomerase (EC 5.3.1.14) Locus tag: Cagg_3316 Name: rhaEW Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) Locus tag: Cagg_3317 Name: rhaB Funciton: Rhamnulokinase (EC 2.7.1.5)
rhaR-rhaG-rhaH-rhaJ-rhaF-rhaM-rhaA-rhaEW-rhaB	-140	7.2	TCGTAA-(4)-TCGAAA	Cagg_3309
	-130	6.9	TCGAAA-(4)-TTGACA
	-120	6.7	TTGACA-(4)-TTGAAA
Chloroflexus sp. Y-400-fl
Position: -91 Score: 6.79033 Sequence: TCGTAA-(4)-TCGTAA Position: -81 Score: 6.50717 Sequence: TCGTAA-(4)-TTGACA Position: -71 Score: 6.65008 Sequence: TTGACA-(4)-TTGAAA Locus tag: Chy400_2467 Name: rhaR Funciton: Transcriptional regulator of rhamnose utilization, DeoR family Locus tag: Chy400_2466 Name: rhaG Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component Locus tag: Chy400_2465 Name: rhaH Funciton: L-rhamnose ABC transporter, permease component 1 Locus tag: Chy400_2464 Name: rhaJ Funciton: L-rhamnose ABC transporter, permease component 2 Locus tag: Chy400_2463 Name: rhaF Funciton: L-rhamnose ABC transporter, duplicated periplasmic rhamnose-binding protein Locus tag: Chy400_2462 Name: rhaM Funciton: L-rhamnose mutarotase Locus tag: Chy400_2461 Name: rhaA Funciton: L-rhamnose isomerase (EC 5.3.1.14) Locus tag: Chy400_2460 Name: rhaEW Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) Locus tag: Chy400_2459 Name: rhaB Funciton: Rhamnulokinase (EC 2.7.1.5)
rhaR-rhaG-rhaH-rhaJ-rhaF-rhaM-rhaA-rhaEW-rhaB	-91	6.8	TCGTAA-(4)-TCGTAA	Chy400_2467
	-81	6.5	TCGTAA-(4)-TTGACA
	-71	6.7	TTGACA-(4)-TTGAAA
Roseiflexus sp. RS-1
Position: -94 Score: 7.64245 Sequence: TCGAAA-(4)-TCGAAA Position: -84 Score: 6.93323 Sequence: TCGAAA-(4)-TTGACA Position: -74 Score: 6.93323 Sequence: TTGACA-(4)-TCGAAA Locus tag: RoseRS_2724 Name: rhaR Funciton: Transcriptional regulator of rhamnose utilization, DeoR family Locus tag: RoseRS_2725 Name: rhaG Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component Locus tag: RoseRS_2726 Name: rhaH Funciton: L-rhamnose ABC transporter, permease component 1 Locus tag: RoseRS_2727 Name: rhaJ Funciton: L-rhamnose ABC transporter, permease component 2 Locus tag: RoseRS_2729 Name: rhaM Funciton: L-rhamnose mutarotase Locus tag: RoseRS_2730 Name: rhaA Funciton: L-rhamnose isomerase (EC 5.3.1.14) Locus tag: RoseRS_2731 Name: rhaEW Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) Locus tag: RoseRS_2732 Name: rhaB Funciton: Rhamnulokinase (EC 2.7.1.5)
rhaR-rhaG-rhaH-rhaJ-rhaM-rhaA-rhaEW-rhaB	-94	7.6	TCGAAA-(4)-TCGAAA	RoseRS_2724
	-84	6.9	TCGAAA-(4)-TTGACA
	-74	6.9	TTGACA-(4)-TCGAAA