Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing PF00731 gene

Properties
Regulog: NihR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Nickel homeostasis
Effector:
Phylum: Firmicutes
Built upon 10 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Lactobacillus brevis ATCC 367
Position: -134
Score: 4.67889
Sequence: CTTAACATTTGGTAAT
Locus tag: LVIS_1849
Name: PF09861
Funciton: Conserved hypothetical protein, PF09861 family
Locus tag: LVIS_1850
Name: PF00731
Funciton: Predicted enzyme, PF00731 family
Locus tag: LVIS_1851
Name: PF01969
Funciton: Conserved hypothetical protein, PF01969 family
Locus tag: LVIS_1852
Name: LSA0790
Funciton: ATP-utilizing enzyme of the PP-loop superfamily
Locus tag: LVIS_1853
Name: LSA0788
Funciton: Predicted glycerol uptake facilitator protein
Locus tag: LVIS_1854
Name: nixA
Funciton: High-affinity nickel permease
PF09861-PF00731-PF01969-LSA0790-LSA0788-nixA -134 4.7 CTTAACATTTGGTAAT LVIS_1849
Lactobacillus fermentum IFO 3956
Position: -127
Score: 4.3771
Sequence: TTTTCCTTATGTAACA
Locus tag: LAF_1733
Name: PF09861
Funciton: Conserved hypothetical protein, PF09861 family
Locus tag: LAF_1732
Name: PF00731
Funciton: Predicted enzyme, PF00731 family
Locus tag: LAF_1731
Name: PF01969
Funciton: Conserved hypothetical protein, PF01969 family
Locus tag: LAF_1730
Name: LSA0788
Funciton: Predicted glycerol uptake facilitator protein
Locus tag: LAF_1729
Name: LSA0790
Funciton: ATP-utilizing enzyme of the PP-loop superfamily
Locus tag: LAF_1728
Name: nixA
Funciton: High-affinity nickel permease
PF09861-PF00731-PF01969-LSA0788-LSA0790-nixA -127 4.4 TTTTCCTTATGTAACA LAF_1733
Lactobacillus plantarum WCFS1
Position: -120
Score: 4.77519
Sequence: GTATACATTTGTTAAC
Locus tag: lp_0104
Name: PF09861
Funciton: Conserved hypothetical protein, PF09861 family
Locus tag: lp_0105
Name: PF00731
Funciton: Predicted enzyme, PF00731 family
PF09861-PF00731 -120 4.8 GTATACATTTGTTAAC lp_0104
Lactobacillus sakei subsp. sakei 23K
Position: -148
Score: 5.02565
Sequence: TTGAACATTTGTTAAC
Locus tag: LSA0784
Name: PF09861
Funciton: Conserved hypothetical protein, PF09861 family
Locus tag: LSA0785
Name: PF00731
Funciton: Predicted enzyme, PF00731 family
Locus tag: LSA0786
Name: PF01969
Funciton: Conserved hypothetical protein, PF01969 family
Locus tag: LSA0787
Name: PF01969
Funciton: Conserved hypothetical protein, PF01969 family
Locus tag: LSA0788
Name: LSA0788
Funciton: Predicted glycerol uptake facilitator protein
Locus tag: LSA0789
Name: null
Funciton: Hypothetical protein
Locus tag: LSA0790
Name: LSA0790
Funciton: ATP-utilizing enzyme of the PP-loop superfamily
PF09861-PF00731-PF01969-PF01969-LSA0788-LSA0789-LSA0790 -148 5 TTGAACATTTGTTAAC LSA0784
Pediococcus pentosaceus ATCC 25745
Position: -95
Score: 4.91674
Sequence: TGTAACAAATGTTATA
Locus tag: PEPE_1694
Name: PF09861
Funciton: Conserved hypothetical protein, PF09861 family
Locus tag: PEPE_1693
Name: PF00731
Funciton: Predicted enzyme, PF00731 family
Locus tag: PEPE_1692
Name: PF01969
Funciton: Conserved hypothetical protein, PF01969 family
Locus tag: PEPE_1691
Name: LSA0788
Funciton: Predicted glycerol uptake facilitator protein
Locus tag: PEPE_1690
Name: LSA0790
Funciton: ATP-utilizing enzyme of the PP-loop superfamily
PF09861-PF00731-PF01969-LSA0788-LSA0790 -95 4.9 TGTAACAAATGTTATA PEPE_1694