Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rhaD gene

Properties
Regulog: RhaR - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator
Biological process: Rhamnose utilization
Effector: Rhamnose
Phylum: Bacteroidetes
Built upon 8 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacteroides cellulosilyticus DSM 14838
Position: -88
Score: 7.12037
Sequence: TCAGAAA-(14)-TCAAAAC
Locus tag: BACCELL_01175
Name: rhaB
Funciton: Rhamnulokinase (EC 2.7.1.5)
Locus tag: BACCELL_01174
Name: rhaA
Funciton: L-rhamnose isomerase (EC 5.3.1.14)
Locus tag: BACCELL_01173
Name: rhaT
Funciton: L-rhamnose-proton symporter
Locus tag: BACCELL_01172
Name: rhaD
Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
Locus tag: BACCELL_01171
Name: rhiN
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
rhaB-rhaA-rhaT-rhaD-rhiN -88 7.1 TCAGAAA-(14)-TCAAAAC BACCELL_01175
Bacteroides dorei DSM 17855
Position: -100
Score: 7.08695
Sequence: CCAAATC-(14)-TCAAAAA
Locus tag: BACDOR_01175
Name: rhaB
Funciton: Rhamnulokinase (EC 2.7.1.5)
Locus tag: BACDOR_01174
Name: rhaA
Funciton: L-rhamnose isomerase (EC 5.3.1.14)
Locus tag: BACDOR_01173
Name: rhaT
Funciton: L-rhamnose-proton symporter
Locus tag: BACDOR_01172
Name: rhaD
Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
rhaB-rhaA-rhaT-rhaD -100 7.1 CCAAATC-(14)-TCAAAAA BACDOR_01175
Bacteroides ovatus ATCC 8483
Position: -107
Score: 8.14966
Sequence: TCAAAAT-(14)-TCAAAAT
Locus tag: BACOVA_03601
Name: rhaB
Funciton: Rhamnulokinase (EC 2.7.1.5)
Locus tag: BACOVA_03602
Name: rhaA
Funciton: L-rhamnose isomerase (EC 5.3.1.14)
Locus tag: BACOVA_03603
Name: rhaT
Funciton: L-rhamnose-proton symporter
Locus tag: BACOVA_03604
Name: rhaD
Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
Locus tag: BACOVA_03605
Name: rhaO
Funciton: Lactaldehyde reductase (EC 1.1.1.77)
rhaB-rhaA-rhaT-rhaD-rhaO -107 8.1 TCAAAAT-(14)-TCAAAAT BACOVA_03601
Bacteroides stercoris ATCC 43183
Position: -95
Score: 7.74299
Sequence: TCAAATC-(14)-TCAAAAT
Locus tag: BACSTE_00367
Name: rhaB
Funciton: Rhamnulokinase (EC 2.7.1.5)
Locus tag: BACSTE_00366
Name: rhaA
Funciton: L-rhamnose isomerase (EC 5.3.1.14)
Locus tag: BACSTE_00365
Name: rhaT
Funciton: L-rhamnose-proton symporter
Locus tag: BACSTE_00364
Name: rhaD
Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
Locus tag: BACSTE_00363
Name: rhaO
Funciton: Lactaldehyde reductase (EC 1.1.1.77)
Locus tag: BACSTE_00362
Name: rhiN
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
rhaB-rhaA-rhaT-rhaD-rhaO-rhiN -95 7.7 TCAAATC-(14)-TCAAAAT BACSTE_00367
Bacteroides thetaiotaomicron VPI-5482
Position: -107
Score: 8.14966
Sequence: TCAAAAT-(14)-TCAAAAT
Locus tag: BT3763
Name: rhaB
Funciton: Rhamnulokinase (EC 2.7.1.5)
Locus tag: BT3764
Name: rhaA
Funciton: L-rhamnose isomerase (EC 5.3.1.14)
Locus tag: BT3765
Name: rhaT
Funciton: L-rhamnose-proton symporter
Locus tag: BT3766
Name: rhaD
Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
Locus tag: BT3767
Name: rhaO
Funciton: Lactaldehyde reductase (EC 1.1.1.77)
rhaB-rhaA-rhaT-rhaD-rhaO -107 8.1 TCAAAAT-(14)-TCAAAAT BT3763
Bacteroides uniformis ATCC 8492
Position: -95
Score: 7.51694
Sequence: TCAAATC-(14)-TCAAAAA
Locus tag: BACUNI_00421
Name: rhaB
Funciton: Rhamnulokinase (EC 2.7.1.5)
Locus tag: BACUNI_00420
Name: rhaA
Funciton: L-rhamnose isomerase (EC 5.3.1.14)
Locus tag: BACUNI_00419
Name: rhaT
Funciton: L-rhamnose-proton symporter
Locus tag: BACUNI_00418
Name: rhaD
Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
Locus tag: BACUNI_00417
Name: rhaO
Funciton: Lactaldehyde reductase (EC 1.1.1.77)
rhaB-rhaA-rhaT-rhaD-rhaO -95 7.5 TCAAATC-(14)-TCAAAAA BACUNI_00421
Bacteroides vulgatus ATCC 8482
Position: -99
Score: 7.08695
Sequence: CCAAATC-(14)-TCAAAAA
Locus tag: BVU_0595
Name: rhaB
Funciton: Rhamnulokinase (EC 2.7.1.5)
Locus tag: BVU_0596
Name: rhaA
Funciton: L-rhamnose isomerase (EC 5.3.1.14)
Locus tag: BVU_0597
Name: rhaT
Funciton: L-rhamnose-proton symporter
Locus tag: BVU_0598
Name: rhaD
Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
rhaB-rhaA-rhaT-rhaD -99 7.1 CCAAATC-(14)-TCAAAAA BVU_0595
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