Orthologous regulated operons containing spoIIAA gene

Properties
Regulog:	CcpA - Clostridia-2
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor (activator)
Biological process:	Carbon catabolism; Carbohydrate metabolism
Effector:	HPr, phosphocarrier protein
Phylum:	Firmicutes

Built upon 113 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Clostridium bartlettii DSM 16795
Position: 2 Score: 3.76563 Sequence: GATAAAATGTTATTTA Locus tag: CLOBAR_01234 Name: spoIIAA Funciton: anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV Locus tag: CLOBAR_01233 Name: spoIIAB Funciton: Anti-sigma F factor (EC 2.7.11.1) Locus tag: CLOBAR_01232 Name: sigF Funciton: RNA polymerase sporulation specific sigma factor SigF
spoIIAA-spoIIAB-sigF	2	3.8	GATAAAATGTTATTTA	CLOBAR_01234
Clostridium difficile 630
Position: 88 Score: 4.53237 Sequence: AAGAAATAGATAACTT Locus tag: CD0770 Name: spoIIAA Funciton: anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV Locus tag: CD0771 Name: spoIIAB Funciton: Anti-sigma F factor (EC 2.7.11.1) Locus tag: CD0772 Name: sigF Funciton: RNA polymerase sporulation specific sigma factor SigF
spoIIAA-spoIIAB-sigF	88	4.5	AAGAAATAGATAACTT	CD0770

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --