Orthologous regulated operons containing sigF gene
| Regulog: | CcpA - Clostridia-2 |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism; Carbohydrate metabolism |
| Effector: | HPr, phosphocarrier protein |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Clostridium bartlettii DSM 16795 | ||||
|
Position: 2
Score: 3.76563 Sequence: GATAAAATGTTATTTA
Locus tag: CLOBAR_01234
Name: spoIIAA Funciton: anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV
Locus tag: CLOBAR_01233
Name: spoIIAB Funciton: Anti-sigma F factor (EC 2.7.11.1)
Locus tag: CLOBAR_01232
Name: sigF Funciton: RNA polymerase sporulation specific sigma factor SigF |
||||
| spoIIAA-spoIIAB-sigF | 2 | 3.8 | GATAAAATGTTATTTA | CLOBAR_01234 |
| Clostridium difficile 630 | ||||
|
Position: 88
Score: 4.53237 Sequence: AAGAAATAGATAACTT
Locus tag: CD0770
Name: spoIIAA Funciton: anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV
Locus tag: CD0771
Name: spoIIAB Funciton: Anti-sigma F factor (EC 2.7.11.1)
Locus tag: CD0772
Name: sigF Funciton: RNA polymerase sporulation specific sigma factor SigF |
||||
| spoIIAA-spoIIAB-sigF | 88 | 4.5 | AAGAAATAGATAACTT | CD0770 |
| Clostridium hiranonis DSM 13275 | ||||
|
Position: -218
Score: 4.02926 Sequence: AATAAAAAGTTATTCT
Locus tag: CLOHIR_00712
Name: sigF Funciton: RNA polymerase sporulation specific sigma factor SigF |
||||
| sigF | -218 | 4 | AATAAAAAGTTATTCT | CLOHIR_00712 |