Orthologous regulated operons containing oppD gene

Properties
Regulog:	CcpA - Clostridia-2
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor (activator)
Biological process:	Carbon catabolism; Carbohydrate metabolism
Effector:	HPr, phosphocarrier protein
Phylum:	Firmicutes

Built upon 113 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Clostridium difficile 630
Position: -305 Score: 3.96992 Sequence: AGCAAAAGGTTTAAAT Position: -302 Score: 3.75194 Sequence: AGGAATTGGTTTACCA Position: -197 Score: 4.07605 Sequence: AATAAAATAATTTGAT Position: -186 Score: 3.75095 Sequence: TTGAAAAAGTTTTTTC Position: -184 Score: 3.62774 Sequence: GAAAAAGTTTTTTCTT Locus tag: CD0853 Name: oppB Funciton: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) Locus tag: CD0854 Name: oppC Funciton: Peptide ABC transporter, permease protein Locus tag: CD0855 Name: oppA Funciton: Oligopeptide ABC transporter oligopeptide-binding protein Locus tag: CD0856 Name: oppD Funciton: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
oppB-oppC-oppA-oppD	-305	4	AGCAAAAGGTTTAAAT	CD0853
	-302	3.8	AGGAATTGGTTTACCA
	-197	4.1	AATAAAATAATTTGAT
	-186	3.8	TTGAAAAAGTTTTTTC
	-184	3.6	GAAAAAGTTTTTTCTT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --