Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing lsrD gene

Properties
Regulog: LsrR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: SorC
Regulation mode: repressor
Biological process: Quorum sensing; Biofilm formation
Effector: 4,5-dihydroxypentan-2,3-dione
Phylum: Proteobacteria
Built upon 19 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Enterobacter sp. 638
Position: -212
Score: 6.01979
Sequence: GAACTCTTATAAAAATTTAGATCATATGTTC
Position: -46
Score: 6.63222
Sequence: GAACATTATTAAATCAAAAAATCATTTGTTC
Locus tag: Ent638_3536
Name: lsrA
Funciton: Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component
Locus tag: Ent638_3535
Name: lsrC
Funciton: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC
Locus tag: Ent638_3534
Name: lsrD
Funciton: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD
Locus tag: Ent638_3533
Name: lsrB
Funciton: Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB
Locus tag: Ent638_3532
Name: lsrF
Funciton: Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-)
Locus tag: Ent638_3531
Name: lsrG
Funciton: Autoinducer 2 (AI-2) modifying protein LsrG
lsrA-lsrC-lsrD-lsrB-lsrF-lsrG -212 6 GAACTCTTATAAAAATTTAGATCATATGTTC Ent638_3536
-46 6.6 GAACATTATTAAATCAAAAAATCATTTGTTC
Escherichia coli str. K-12 substr. MG1655
Position: -231
Score: 6.67963
Sequence: GAACATATTTAAATCTTTAATGCAATTGTTC
Position: -63
Score: 6.5782
Sequence: GAACAAATTAAAAGCAGAAATACATTTGTTC
Locus tag: b1513
Name: lsrA
Funciton: Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component
Locus tag: b1514
Name: lsrC
Funciton: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC
Locus tag: b1515
Name: lsrD
Funciton: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD
Locus tag: b1516
Name: lsrB
Funciton: Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB
Locus tag: b1517
Name: lsrF
Funciton: Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-)
Locus tag: b1518
Name: lsrG
Funciton: Autoinducer 2 (AI-2) modifying protein LsrG
lsrA-lsrC-lsrD-lsrB-lsrF-lsrG -231 6.7 GAACATATTTAAATCTTTAATGCAATTGTTC b1513
-63 6.6 GAACAAATTAAAAGCAGAAATACATTTGTTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -210
Score: 6.01979
Sequence: GAACTCTTATAAAAATTTAGATCATATGTTC
Position: -43
Score: 6.6899
Sequence: GAACATTATTAAATTTAAAAATCATTTGTTC
Locus tag: KPN_03507
Name: lsrA
Funciton: Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component
Locus tag: KPN_03506
Name: lsrC
Funciton: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC
Locus tag: KPN_03505
Name: lsrD
Funciton: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD
Locus tag: KPN_03504
Name: lsrB
Funciton: Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB
Locus tag: KPN_03503
Name: lsrF
Funciton: Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-)
Locus tag: KPN_03502
Name: lsrG
Funciton: Autoinducer 2 (AI-2) modifying protein LsrG
lsrA-lsrC-lsrD-lsrB-lsrF-lsrG -210 6 GAACTCTTATAAAAATTTAGATCATATGTTC KPN_03507
-43 6.7 GAACATTATTAAATTTAAAAATCATTTGTTC
Photorhabdus luminescens subsp. laumondii TTO1
Position: -72
Score: 6.77146
Sequence: GAACAATTGTTTTTTAAATAGATAAATGTTC
Locus tag: plu3143
Name: lsrA
Funciton: Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component
Locus tag: plu3144
Name: lsrC
Funciton: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC
Locus tag: plu3145
Name: lsrD
Funciton: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD
Locus tag: plu3146
Name: lsrB
Funciton: Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB
Locus tag: plu3147
Name: lsrF
Funciton: Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-)
Locus tag: plu3148
Name: lsrG
Funciton: Autoinducer 2 (AI-2) modifying protein LsrG
lsrA-lsrC-lsrD-lsrB-lsrF-lsrG -72 6.8 GAACAATTGTTTTTTAAATAGATAAATGTTC plu3143
Salmonella typhimurium LT2
Position: -233
Score: 6.47538
Sequence: GAACATTTCTAAATCATTAACACAATTGTTC
Position: -67
Score: 6.62558
Sequence: GAACAATTTCTTTTTCAAAAAACATTTGTTC
Locus tag: STM4074
Name: lsrA
Funciton: Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component
Locus tag: STM4075
Name: lsrC
Funciton: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC
Locus tag: STM4076
Name: lsrD
Funciton: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD
Locus tag: STM4077
Name: lsrB
Funciton: Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB
Locus tag: STM4078
Name: lsrF
Funciton: Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-)
Locus tag: STM4079.S
Name: lsrG
Funciton: Autoinducer 2 (AI-2) modifying protein LsrG
lsrA-lsrC-lsrD-lsrB-lsrF-lsrG -233 6.5 GAACATTTCTAAATCATTAACACAATTGTTC STM4074
-67 6.6 GAACAATTTCTTTTTCAAAAAACATTTGTTC
Yersinia pestis KIM
Position: 2
Score: 6.60668
Sequence: GAACACTTTTAAATTAAAAATATTTTTGTTC
Locus tag: y3769
Name: lsrA
Funciton: Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component
Locus tag: y3770
Name: lsrC
Funciton: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC
Locus tag: y3771
Name: lsrD
Funciton: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD
Locus tag: y3772
Name: lsrB
Funciton: Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB
Locus tag: y3773
Name: lsrF
Funciton: Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-)
Locus tag: y3774
Name: lsrG
Funciton: Autoinducer 2 (AI-2) modifying protein LsrG
lsrA-lsrC-lsrD-lsrB-lsrF-lsrG 2 6.6 GAACACTTTTAAATTAAAAATATTTTTGTTC y3769
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