Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rny gene

Properties
Regulog: CcpA - Clostridia-1
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor (activator)
Biological process: Carbohydrate metabolism
Effector: HPr, phosphocarrier protein
Phylum: Firmicutes
Built upon 436 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Clostridium acetobutylicum ATCC 824
Position: -183
Score: 4.1235
Sequence: TTGTAAACTCTTTAAT
Locus tag: CAC1816
Name: rny
Funciton: Ribonuclease Y
rny -183 4.1 TTGTAAACTCTTTAAT CAC1816
Clostridium botulinum A str. ATCC 3502
Position: -208
Score: 4.14026
Sequence: ATGAAAAAATATATAA
Locus tag: CBO2404
Name: rny
Funciton: Ribonuclease Y
rny -208 4.1 ATGAAAAAATATATAA CBO2404
Clostridium novyi NT
Position: -223
Score: 4.67476
Sequence: ATTAAAAAGTTTTTAT
Locus tag: NT01CX_2122
Name: rny
Funciton: Ribonuclease Y
rny -223 4.7 ATTAAAAAGTTTTTAT NT01CX_2122
Clostridium tetani E88
Position: -69
Score: 4.11903
Sequence: ATAAAAAAATTAATAT
Locus tag: CTC01290
Name: rny
Funciton: Ribonuclease Y
rny -69 4.1 ATAAAAAAATTAATAT CTC01290
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