Orthologous regulated operons containing ptnD gene

Properties
Regulog:	CcpA - Clostridia-1
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor (activator)
Biological process:	Carbohydrate metabolism
Effector:	HPr, phosphocarrier protein
Phylum:	Firmicutes

Built upon 436 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Clostridium acetobutylicum ATCC 824
Position: -321 Score: 4.63959 Sequence: ATGAAAACGTATTAAT Locus tag: CAP0066 Name: ptnA Funciton: PTS system, mannose-specific IIBA component (EC 2.7.1.69) Locus tag: CAP0067 Name: manY Funciton: PTS system, mannose-specific IIC component (EC 2.7.1.69) Locus tag: CAP0068 Name: ptnD Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69)
ptnA-manY-ptnD	-321	4.6	ATGAAAACGTATTAAT	CAP0066
Clostridium beijerincki NCIMB 8052
Position: -374 Score: 4.1437 Sequence: ATAAAAATTATTTTAT Locus tag: Cbei_0711 Name: ptnA Funciton: PTS system, mannose-specific IIBA component (EC 2.7.1.69) Locus tag: Cbei_0712 Name: manY Funciton: PTS system, mannose-specific IIC component (EC 2.7.1.69) Locus tag: Cbei_0713 Name: ptnD Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69)
ptnA-manY-ptnD	-374	4.1	ATAAAAATTATTTTAT	Cbei_0711
Clostridium botulinum A str. ATCC 3502
Position: -279 Score: 3.93449 Sequence: TATCAAATGTTTTAAA Locus tag: CBO2845 Name: ptnD Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69)
ptnD	-279	3.9	TATCAAATGTTTTAAA	CBO2845
Clostridium butyricum 5521
Position: -370 Score: 4.16339 Sequence: ATGAAAATAAATTAAA Locus tag: CBY_1459 Name: ptnA Funciton: PTS system, mannose-specific IIBA component (EC 2.7.1.69) Locus tag: CBY_1460 Name: manY Funciton: PTS system, mannose-specific IIC component (EC 2.7.1.69) Locus tag: CBY_1461 Name: ptnD Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69)
ptnA-manY-ptnD	-370	4.2	ATGAAAATAAATTAAA	CBY_1459
Clostridium perfringens ATCC 13124
Position: -235 Score: 4.50945 Sequence: TTGAAAATTTTTTAAA Locus tag: CPF_0818 Name: ptnA Funciton: PTS system, mannose-specific IIBA component (EC 2.7.1.69) Locus tag: CPF_0819 Name: manY Funciton: PTS system, mannose-specific IIC component (EC 2.7.1.69) Locus tag: CPF_0820 Name: ptnD Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69)
ptnA-manY-ptnD	-235	4.5	TTGAAAATTTTTTAAA	CPF_0818