Orthologous regulated operons containing nifD gene

Properties
Regulog:	DVUA0143 - Desulfovibrionales
Regulator type:	Transcription factor
Regulator family:	Fis
Regulation mode:	activator
Biological process:	Nitrogen fixation
Effector:
Phylum:	Proteobacteria/delta

Built upon 22 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Desulfomicrobium baculatum DSM 4028
Position: -184 Score: 5.25669 Sequence: CTACATTTTTGTCT Locus tag: Dbac_0834 Name: nifH Funciton: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH Locus tag: Dbac_0835 Name: null Funciton: nitrogen regulatory protein P-II Locus tag: Dbac_0836 Name: null Funciton: nitrogen regulatory protein P-II Locus tag: Dbac_0837 Name: nifD Funciton: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) Locus tag: Dbac_0838 Name: nifK Funciton: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) Locus tag: Dbac_0839 Name: null Funciton: Dinitrogenase iron-molybdenum cofactor biosynthesis protein Locus tag: Dbac_0840 Name: null Funciton: ferredoxin, 2fe-2s Locus tag: Dbac_0841 Name: nifE Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE Locus tag: Dbac_0842 Name: nifN Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN Locus tag: Dbac_0843 Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
nifH-Dbac_0835-Dbac_0836-nifD-nifK-Dbac_0839-Dbac_0840-nifE-nifN-nifB	-184	5.3	CTACATTTTTGTCT	Dbac_0834
Desulfovibrio magneticus RS-1
Position: -204 Score: 5.07262 Sequence: CGACATTTATGTCG Position: -191 Score: 4.35618 Sequence: GAACATTTTTGTCG Position: -168 Score: 4.17482 Sequence: CAACAAAAATGTTT Locus tag: DMR_20560 Name: nifH Funciton: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH Locus tag: DMR_20550 Name: null Funciton: nitrogen regulatory protein P-II Locus tag: DMR_20540 Name: null Funciton: nitrogen regulatory protein P-II Locus tag: DMR_20530 Name: nifD Funciton: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) Locus tag: DMR_20520 Name: nifK Funciton: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) Locus tag: DMR_20510 Name: null Funciton: ferredoxin, 2fe-2s
nifH-DMR_20550-DMR_20540-nifD-nifK-DMR_20510	-204	5.1	CGACATTTATGTCG	DMR_20560
	-191	4.4	GAACATTTTTGTCG
	-168	4.2	CAACAAAAATGTTT
Desulfovibrio salexigens DSM 2638
Position: -200 Score: 4.08356 Sequence: CTGCAAAAATGTAG Position: -182 Score: 4.95185 Sequence: CTACAATTTTGTAC Locus tag: Desal_0447 Name: nifH Funciton: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH Locus tag: Desal_0446 Name: null Funciton: nitrogen regulatory protein P-II Locus tag: Desal_0445 Name: null Funciton: nitrogen regulatory protein P-II Locus tag: Desal_0444 Name: nifD Funciton: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) Locus tag: Desal_0443 Name: nifK Funciton: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) Locus tag: Desal_0442 Name: null Funciton: Dinitrogenase iron-molybdenum cofactor biosynthesis protein Locus tag: Desal_0441 Name: null Funciton: ferredoxin, 2fe-2s Locus tag: Desal_0440 Name: null Funciton: GCN5-related N-acetyltransferase Locus tag: Desal_0439 Name: nifE Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE Locus tag: Desal_0438 Name: nifN Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN Locus tag: Desal_0437 Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
nifH-Desal_0446-Desal_0445-nifD-nifK-Desal_0442-Desal_0441-Desal_0440-nifE-nifN-nifB	-200	4.1	CTGCAAAAATGTAG	Desal_0447
	-182	5	CTACAATTTTGTAC
Desulfovibrio vulgaris Hildenborough
Position: -435 Score: 4.7845 Sequence: CTACAAAAATGTAG Locus tag: DVUA0015 Name: nifH Funciton: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH Locus tag: DVUA0014 Name: glnB-3 Funciton: nitrogen regulatory protein P-II Locus tag: DVUA0013 Name: glnB-2 Funciton: nitrogen regulatory protein P-II Locus tag: DVUA0012 Name: nifD Funciton: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) Locus tag: DVUA0011 Name: nifK Funciton: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) Locus tag: DVUA0010 Name: null Funciton: ferredoxin, 2fe-2s Locus tag: DVUA0009 Name: nifE Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE Locus tag: DVUA0008 Name: nifN Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN Locus tag: DVUA0007 Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
nifH-glnB-3-glnB-2-nifD-nifK-DVUA0010-nifE-nifN-nifB	-435	4.8	CTACAAAAATGTAG	DVUA0015
Desulfovibrio vulgaris str. Miyazaki F
Position: -230 Score: 4.24909 Sequence: CAACGCATTTGTCG Position: -212 Score: 4.56277 Sequence: CGACAAAATGGTCG Locus tag: DvMF_2613 Name: nifH Funciton: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH Locus tag: DvMF_2614 Name: null Funciton: nitrogen regulatory protein P-II Locus tag: DvMF_2615 Name: null Funciton: nitrogen regulatory protein P-II Locus tag: DvMF_2616 Name: nifD Funciton: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) Locus tag: DvMF_2617 Name: nifK Funciton: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) Locus tag: DvMF_2618 Name: null Funciton: Dinitrogenase iron-molybdenum cofactor biosynthesis protein Locus tag: DvMF_2619 Name: null Funciton: ferredoxin, 2fe-2s Locus tag: DvMF_2620 Name: nifE Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE Locus tag: DvMF_2621 Name: nifN Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN Locus tag: DvMF_2622 Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
nifH-DvMF_2614-DvMF_2615-nifD-nifK-DvMF_2618-DvMF_2619-nifE-nifN-nifB	-230	4.2	CAACGCATTTGTCG	DvMF_2613
	-212	4.6	CGACAAAATGGTCG