Orthologous regulated operons containing secDF gene
| Regulog: | Crp - Bacteroidaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | activator |
| Biological process: | |
| Effector: | |
| Phylum: | Bacteroidetes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Bacteroides cellulosilyticus DSM 14838 | ||||
|
Position: -196
Score: 5.03588 Sequence: TAATATGTTACACAAAAGATAT
Position: -62
Score: 5.79697 Sequence: TTTTCTGTTATAGAACAGAATT
Locus tag: BACCELL_02471
Name: PF01694 Funciton: Peptidase S54, rhomboid domain
Locus tag: BACCELL_02470
Name: PF01694 Funciton: Peptidase S54, rhomboid domain
Locus tag: BACCELL_02469
Name: PF03372 Funciton: Endonuclease/exonuclease/phosphatase
Locus tag: BACCELL_02468
Name: PF01432 Funciton: Peptidase M3A/M3B, thimet/oligopeptidase F
Locus tag: BACCELL_02467
Name: secDF Funciton: Preprotein translocase subunits SecD-SecF |
||||
| PF01694-PF01694-PF03372-PF01432-secDF | -196 | 5 | TAATATGTTACACAAAAGATAT | BACCELL_02471 |
| -62 | 5.8 | TTTTCTGTTATAGAACAGAATT | ||
| Bacteroides dorei DSM 17855 | ||||
|
Position: -71
Score: 6.17781 Sequence: TTTTCTGTTATATAACAGAATA
Locus tag: BACDOR_01705
Name: PF01694 Funciton: Peptidase S54, rhomboid domain
Locus tag: BACDOR_01704
Name: PF01694 Funciton: Peptidase S54, rhomboid domain
Locus tag: BACDOR_01703
Name: PF03372 Funciton: Endonuclease/exonuclease/phosphatase
Locus tag: BACDOR_01702
Name: PF01432 Funciton: Peptidase M3A/M3B, thimet/oligopeptidase F
Locus tag: BACDOR_01701
Name: secDF Funciton: Preprotein translocase subunits SecD-SecF |
||||
| PF01694-PF01694-PF03372-PF01432-secDF | -71 | 6.2 | TTTTCTGTTATATAACAGAATA | BACDOR_01705 |
| Bacteroides eggerthii DSM 20697 | ||||
|
Position: -188
Score: 5.34989 Sequence: TAATATGTTACACAAAAGAAAA
Position: -61
Score: 5.79697 Sequence: TTTTCTGTTATAGAACAGAATT
Locus tag: BACEGG_03101
Name: PF01694 Funciton: Peptidase S54, rhomboid domain
Locus tag: BACEGG_03102
Name: PF01694 Funciton: Peptidase S54, rhomboid domain
Locus tag: BACEGG_03103
Name: PF03372 Funciton: Endonuclease/exonuclease/phosphatase
Locus tag: BACEGG_03104
Name: PF01432 Funciton: Peptidase M3A/M3B, thimet/oligopeptidase F
Locus tag: BACEGG_03105
Name: secDF Funciton: Preprotein translocase subunits SecD-SecF |
||||
| PF01694-PF01694-PF03372-PF01432-secDF | -188 | 5.3 | TAATATGTTACACAAAAGAAAA | BACEGG_03101 |
| -61 | 5.8 | TTTTCTGTTATAGAACAGAATT | ||
| Bacteroides ovatus ATCC 8483 | ||||
|
Position: -195
Score: 5.03588 Sequence: ATATATGTTACACAAAAGATTA
Position: -66
Score: 5.41387 Sequence: TTTCATGCTTTAAAACAGAATT
Locus tag: BACOVA_02079
Name: PF01694 Funciton: Peptidase S54, rhomboid domain
Locus tag: BACOVA_02080
Name: PF01694 Funciton: Peptidase S54, rhomboid domain
Locus tag: BACOVA_02081
Name: PF03372 Funciton: Endonuclease/exonuclease/phosphatase
Locus tag: BACOVA_02082
Name: PF01432 Funciton: Peptidase M3A/M3B, thimet/oligopeptidase F
Locus tag: BACOVA_02083
Name: secDF Funciton: Preprotein translocase subunits SecD-SecF |
||||
| PF01694-PF01694-PF03372-PF01432-secDF | -195 | 5 | ATATATGTTACACAAAAGATTA | BACOVA_02079 |
| -66 | 5.4 | TTTCATGCTTTAAAACAGAATT | ||
| Bacteroides stercoris ATCC 43183 | ||||
|
Position: -188
Score: 4.34752 Sequence: TTAATTGTTACACAAAAGAAAA
Position: -61
Score: 5.79697 Sequence: TTTTCTGTTATAGAACAGAATT
Locus tag: BACSTE_02140
Name: PF01694 Funciton: Peptidase S54, rhomboid domain
Locus tag: BACSTE_02141
Name: PF01694 Funciton: Peptidase S54, rhomboid domain
Locus tag: BACSTE_02142
Name: PF03372 Funciton: Endonuclease/exonuclease/phosphatase
Locus tag: BACSTE_02143
Name: PF01432 Funciton: Peptidase M3A/M3B, thimet/oligopeptidase F
Locus tag: BACSTE_02144
Name: secDF Funciton: Preprotein translocase subunits SecD-SecF |
||||
| PF01694-PF01694-PF03372-PF01432-secDF | -188 | 4.3 | TTAATTGTTACACAAAAGAAAA | BACSTE_02140 |
| -61 | 5.8 | TTTTCTGTTATAGAACAGAATT | ||
| Bacteroides thetaiotaomicron VPI-5482 | ||||
|
Position: -192
Score: 4.87887 Sequence: ATATATGTTACACAAAAGATTT
Position: -69
Score: 4.98217 Sequence: TTCCATGCTTTAAAACAGAATT
Locus tag: BT2831
Name: PF01694 Funciton: Peptidase S54, rhomboid domain
Locus tag: BT2832
Name: PF01694 Funciton: Peptidase S54, rhomboid domain
Locus tag: BT2833
Name: PF03372 Funciton: Endonuclease/exonuclease/phosphatase
Locus tag: BT2834
Name: PF01432 Funciton: Peptidase M3A/M3B, thimet/oligopeptidase F
Locus tag: BT2835
Name: secDF Funciton: Preprotein translocase subunits SecD-SecF |
||||
| PF01694-PF01694-PF03372-PF01432-secDF | -192 | 4.9 | ATATATGTTACACAAAAGATTT | BT2831 |
| -69 | 5 | TTCCATGCTTTAAAACAGAATT | ||
| Bacteroides uniformis ATCC 8492 | ||||
|
Position: -230
Score: 5.03588 Sequence: TAATATGTTACACAAAAGATAT
Position: -97
Score: 5.79697 Sequence: TTTTCTGTTATAGAACAGAATT
Locus tag: BACUNI_03999
Name: PF01694 Funciton: Peptidase S54, rhomboid domain
Locus tag: BACUNI_04000
Name: PF01694 Funciton: Peptidase S54, rhomboid domain
Locus tag: BACUNI_04001
Name: PF03372 Funciton: Endonuclease/exonuclease/phosphatase
Locus tag: BACUNI_04002
Name: PF01432 Funciton: Peptidase M3A/M3B, thimet/oligopeptidase F
Locus tag: BACUNI_04003
Name: secDF Funciton: Preprotein translocase subunits SecD-SecF |
||||
| PF01694-PF01694-PF03372-PF01432-secDF | -230 | 5 | TAATATGTTACACAAAAGATAT | BACUNI_03999 |
| -97 | 5.8 | TTTTCTGTTATAGAACAGAATT | ||
| Bacteroides vulgatus ATCC 8482 | ||||
|
Position: -71
Score: 6.17781 Sequence: TTTTCTGTTATATAACAGAATA
Locus tag: BVU_0995
Name: PF01694 Funciton: Peptidase S54, rhomboid domain
Locus tag: BVU_0994
Name: PF01694 Funciton: Peptidase S54, rhomboid domain
Locus tag: BVU_0993
Name: PF03372 Funciton: Endonuclease/exonuclease/phosphatase
Locus tag: BVU_0992
Name: PF01432 Funciton: Peptidase M3A/M3B, thimet/oligopeptidase F
Locus tag: BVU_0991
Name: secDF Funciton: Preprotein translocase subunits SecD-SecF |
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| PF01694-PF01694-PF03372-PF01432-secDF | -71 | 6.2 | TTTTCTGTTATATAACAGAATA | BVU_0995 |