Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing hyaB gene

Properties
Regulog: Fnr - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode:
Biological process: Anaerobic metabolism
Effector: Oxygen
Phylum: Proteobacteria/gamma
Built upon 541 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -107
Score: 4.22343
Sequence: TTGACGTGTATCAA
Locus tag: Sama_1679
Name: hyaA
Funciton: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1)
Locus tag: Sama_1678
Name: hyaB
Funciton: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1)
Locus tag: Sama_1677
Name: hyaC
Funciton: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1)
Locus tag: Sama_1676
Name: hyaD
Funciton: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1)
Locus tag: Sama_1675
Name: hyaE
Funciton: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1)
Locus tag: Sama_1674
Name: hyaF
Funciton: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1)
hyaA-hyaB-hyaC-hyaD-hyaE-hyaF -107 4.2 TTGACGTGTATCAA Sama_1679
Shewanella baltica OS155
Position: -163
Score: 3.78427
Sequence: TAGATCTACGTCAT
Position: -103
Score: 4.85516
Sequence: TTGATATACATCAA
Locus tag: Sbal_1889
Name: hyaA
Funciton: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1)
Locus tag: Sbal_1888
Name: hyaB
Funciton: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1)
Locus tag: Sbal_1887
Name: hyaC
Funciton: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1)
Locus tag: Sbal_1886
Name: hyaD
Funciton: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1)
Locus tag: Sbal_1885
Name: hyaE
Funciton: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1)
Locus tag: Sbal_1884
Name: hyaF
Funciton: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1)
hyaA-hyaB-hyaC-hyaD-hyaE-hyaF -163 3.8 TAGATCTACGTCAT Sbal_1889
-103 4.9 TTGATATACATCAA
Shewanella frigidimarina NCIMB 400
Position: -164
Score: 4.44868
Sequence: TTGATCAACATCAT
Position: -103
Score: 4.72985
Sequence: TTGATTTATATCAA
Locus tag: Sfri_2103
Name: hyaA
Funciton: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1)
Locus tag: Sfri_2104
Name: hyaB
Funciton: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1)
Locus tag: Sfri_2105
Name: hyaC
Funciton: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1)
Locus tag: Sfri_2106
Name: hyaD
Funciton: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1)
Locus tag: Sfri_2107
Name: hyaE
Funciton: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1)
Locus tag: Sfri_2108
Name: hyaF
Funciton: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1)
hyaA-hyaB-hyaC-hyaD-hyaE-hyaF -164 4.4 TTGATCAACATCAT Sfri_2103
-103 4.7 TTGATTTATATCAA
Shewanella halifaxensis HAW-EB4
Position: -208
Score: 3.80531
Sequence: GTGATCTCCATCAC
Position: -148
Score: 5.16517
Sequence: ATGATCTAGCTCAA
Position: -87
Score: 3.93909
Sequence: TTGACGCATATCAA
Locus tag: Shal_2261
Name: hyaA
Funciton: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1)
Locus tag: Shal_2262
Name: hyaB
Funciton: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1)
Locus tag: Shal_2263
Name: hyaC
Funciton: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1)
Locus tag: Shal_2264
Name: hyaD
Funciton: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1)
Locus tag: Shal_2265
Name: hyaE
Funciton: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1)
Locus tag: Shal_2266
Name: hyaF
Funciton: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1)
hyaA-hyaB-hyaC-hyaD-hyaE-hyaF -208 3.8 GTGATCTCCATCAC Shal_2261
-148 5.2 ATGATCTAGCTCAA
-87 3.9 TTGACGCATATCAA
Shewanella loihica PV-4
Position: -220
Score: 4.65829
Sequence: TTGAAGCGGATCAA
Position: -160
Score: 4.79381
Sequence: TTGATCCAGCTCAT
Position: -99
Score: 4.23924
Sequence: TTGACATACATCAA
Locus tag: Shew_1765
Name: hyaA
Funciton: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1)
Locus tag: Shew_1764
Name: hyaB
Funciton: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1)
Locus tag: Shew_1763
Name: hyaC
Funciton: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1)
Locus tag: Shew_1762
Name: hyaD
Funciton: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1)
Locus tag: Shew_1761
Name: hyaE
Funciton: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1)
Locus tag: Shew_1760
Name: hyaF
Funciton: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1)
hyaA-hyaB-hyaC-hyaD-hyaE-hyaF -220 4.7 TTGAAGCGGATCAA Shew_1765
-160 4.8 TTGATCCAGCTCAT
-99 4.2 TTGACATACATCAA
Shewanella oneidensis MR-1
Position: -101
Score: 4.81332
Sequence: TTGATATGCATCAA
Locus tag: SO2099
Name: hyaA
Funciton: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1)
Locus tag: SO2098
Name: hyaB
Funciton: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1)
Locus tag: SO2097
Name: hyaC
Funciton: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1)
Locus tag: SO2096
Name: hyaD
Funciton: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1)
Locus tag: SO2095
Name: hyaE
Funciton: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1)
Locus tag: SO2094
Name: hyaF
Funciton: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1)
hyaA-hyaB-hyaC-hyaD-hyaE-hyaF -101 4.8 TTGATATGCATCAA SO2099
Shewanella pealeana ATCC 700345
Position: -147
Score: 5.16517
Sequence: ATGATCTAGCTCAA
Position: -86
Score: 3.78775
Sequence: TTGACTCATATCAA
Locus tag: Spea_2033
Name: hyaA
Funciton: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1)
Locus tag: Spea_2032
Name: hyaB
Funciton: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1)
Locus tag: Spea_2031
Name: hyaC
Funciton: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1)
Locus tag: Spea_2030
Name: hyaD
Funciton: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1)
Locus tag: Spea_2029
Name: hyaE
Funciton: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1)
Locus tag: Spea_2028
Name: hyaF
Funciton: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1)
hyaA-hyaB-hyaC-hyaD-hyaE-hyaF -147 5.2 ATGATCTAGCTCAA Spea_2033
-86 3.8 TTGACTCATATCAA
Shewanella putrefaciens CN-32
Position: -103
Score: 4.85516
Sequence: TTGATATACATCAA
Locus tag: Sputcn32_2088
Name: hyaA
Funciton: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1)
Locus tag: Sputcn32_2089
Name: hyaB
Funciton: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1)
Locus tag: Sputcn32_2090
Name: hyaC
Funciton: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1)
Locus tag: Sputcn32_2091
Name: hyaD
Funciton: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1)
Locus tag: Sputcn32_2092
Name: hyaE
Funciton: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1)
Locus tag: Sputcn32_2093
Name: hyaF
Funciton: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1)
hyaA-hyaB-hyaC-hyaD-hyaE-hyaF -103 4.9 TTGATATACATCAA Sputcn32_2088
Shewanella sediminis HAW-EB3
Position: -158
Score: 4.63853
Sequence: ATGATCTAGTTCAT
Position: -98
Score: 4.4533
Sequence: TTGATGTGAGTCAA
Locus tag: Ssed_1908
Name: hyaA
Funciton: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1)
Locus tag: Ssed_1907
Name: hyaB
Funciton: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1)
Locus tag: Ssed_1906
Name: hyaC
Funciton: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1)
Locus tag: Ssed_1905
Name: hyaD
Funciton: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1)
Locus tag: Ssed_1904
Name: hyaE
Funciton: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1)
Locus tag: Ssed_1903
Name: hyaF
Funciton: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1)
hyaA-hyaB-hyaC-hyaD-hyaE-hyaF -158 4.6 ATGATCTAGTTCAT Ssed_1908
-98 4.5 TTGATGTGAGTCAA
Shewanella sp ANA-3
Position: -162
Score: 4.32352
Sequence: TAGATCTGCATCAT
Position: -102
Score: 4.81332
Sequence: TTGATATGCATCAA
Locus tag: Shewana3_1880
Name: hyaA
Funciton: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1)
Locus tag: Shewana3_1879
Name: hyaB
Funciton: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1)
Locus tag: Shewana3_1878
Name: hyaC
Funciton: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1)
Locus tag: Shewana3_1877
Name: hyaD
Funciton: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1)
Locus tag: Shewana3_1876
Name: hyaE
Funciton: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1)
Locus tag: Shewana3_1875
Name: hyaF
Funciton: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1)
hyaA-hyaB-hyaC-hyaD-hyaE-hyaF -162 4.3 TAGATCTGCATCAT Shewana3_1880
-102 4.8 TTGATATGCATCAA
Shewanella sp MR-4
Position: -162
Score: 4.32352
Sequence: TAGATCTGCATCAT
Position: -102
Score: 4.81332
Sequence: TTGATATGCATCAA
Locus tag: Shewmr4_1822
Name: hyaA
Funciton: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1)
Locus tag: Shewmr4_1821
Name: hyaB
Funciton: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1)
Locus tag: Shewmr4_1820
Name: hyaC
Funciton: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1)
Locus tag: Shewmr4_1819
Name: hyaD
Funciton: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1)
Locus tag: Shewmr4_1818
Name: hyaE
Funciton: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1)
Locus tag: Shewmr4_1817
Name: hyaF
Funciton: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1)
hyaA-hyaB-hyaC-hyaD-hyaE-hyaF -162 4.3 TAGATCTGCATCAT Shewmr4_1822
-102 4.8 TTGATATGCATCAA
Shewanella sp MR-7
Position: -162
Score: 4.32352
Sequence: TAGATCTGCATCAT
Position: -102
Score: 4.81332
Sequence: TTGATATGCATCAA
Locus tag: Shewmr7_2155
Name: hyaA
Funciton: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1)
Locus tag: Shewmr7_2156
Name: hyaB
Funciton: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1)
Locus tag: Shewmr7_2157
Name: hyaC
Funciton: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1)
Locus tag: Shewmr7_2158
Name: hyaD
Funciton: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1)
Locus tag: Shewmr7_2159
Name: hyaE
Funciton: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1)
Locus tag: Shewmr7_2160
Name: hyaF
Funciton: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1)
hyaA-hyaB-hyaC-hyaD-hyaE-hyaF -162 4.3 TAGATCTGCATCAT Shewmr7_2155
-102 4.8 TTGATATGCATCAA
Shewanella sp W3-18-1
Position: -103
Score: 4.85516
Sequence: TTGATATACATCAA
Locus tag: Sputw3181_1924
Name: hyaA
Funciton: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1)
Locus tag: Sputw3181_1923
Name: hyaB
Funciton: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1)
Locus tag: Sputw3181_1922
Name: hyaC
Funciton: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1)
Locus tag: Sputw3181_1921
Name: hyaD
Funciton: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1)
Locus tag: Sputw3181_1920
Name: hyaE
Funciton: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1)
Locus tag: Sputw3181_1919
Name: hyaF
Funciton: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1)
hyaA-hyaB-hyaC-hyaD-hyaE-hyaF -103 4.9 TTGATATACATCAA Sputw3181_1924
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