Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing coxB gene

Properties
Regulog: Fnr - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode:
Biological process: Anaerobic metabolism
Effector: Oxygen
Phylum: Proteobacteria/gamma
Built upon 541 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -314
Score: 4.89002
Sequence: GTGATCTTGATCAA
Locus tag: Sama_3483
Name: coxB
Funciton: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1)
Locus tag: Sama_3484
Name: coxA
Funciton: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1)
Locus tag: Sama_3485
Name: coxZ
Funciton: Cytochrome c oxidase biogenesis protein, predicted copper delivery
Locus tag: Sama_3486
Name: coxC
Funciton: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1)
coxB-coxA-coxZ-coxC -314 4.9 GTGATCTTGATCAA Sama_3483
Shewanella baltica OS155
Position: -313
Score: 4.89002
Sequence: GTGATCTTGATCAA
Locus tag: Sbal_0154
Name: coxB
Funciton: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1)
Locus tag: Sbal_0153
Name: coxA
Funciton: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1)
Locus tag: Sbal_0152
Name: coxZ
Funciton: Cytochrome c oxidase biogenesis protein, predicted copper delivery
Locus tag: Sbal_0151
Name: coxC
Funciton: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1)
coxB-coxA-coxZ-coxC -313 4.9 GTGATCTTGATCAA Sbal_0154
Shewanella denitrificans OS217
Position: -312
Score: 4.89002
Sequence: GTGATCTTGATCAA
Locus tag: Sden_3517
Name: coxB
Funciton: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1)
Locus tag: Sden_3518
Name: coxA
Funciton: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1)
Locus tag: Sden_3519
Name: coxZ
Funciton: Cytochrome c oxidase biogenesis protein, predicted copper delivery
Locus tag: Sden_3520
Name: coxC
Funciton: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1)
coxB-coxA-coxZ-coxC -312 4.9 GTGATCTTGATCAA Sden_3517
Shewanella frigidimarina NCIMB 400
Position: -317
Score: 4.89002
Sequence: GTGATCTTGATCAA
Position: -209
Score: 4.79903
Sequence: ATGATCCAAATCAA
Locus tag: Sfri_0258
Name: coxB
Funciton: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1)
Locus tag: Sfri_0257
Name: coxA
Funciton: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1)
Locus tag: Sfri_0256
Name: coxZ
Funciton: Cytochrome c oxidase biogenesis protein, predicted copper delivery
Locus tag: Sfri_0255
Name: coxC
Funciton: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1)
coxB-coxA-coxZ-coxC -317 4.9 GTGATCTTGATCAA Sfri_0258
-209 4.8 ATGATCCAAATCAA
Shewanella halifaxensis HAW-EB4
Position: -372
Score: 4.89002
Sequence: GTGATCTTGATCAA
Locus tag: Shal_0258
Name: coxB
Funciton: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1)
Locus tag: Shal_0257
Name: coxA
Funciton: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1)
Locus tag: Shal_0256
Name: coxZ
Funciton: Cytochrome c oxidase biogenesis protein, predicted copper delivery
Locus tag: Shal_0255
Name: coxC
Funciton: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1)
coxB-coxA-coxZ-coxC -372 4.9 GTGATCTTGATCAA Shal_0258
Shewanella loihica PV-4
Position: -317
Score: 4.89002
Sequence: GTGATCTTGATCAA
Locus tag: Shew_0125
Name: coxB
Funciton: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1)
Locus tag: Shew_0124
Name: coxA
Funciton: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1)
Locus tag: Shew_0123
Name: coxZ
Funciton: Cytochrome c oxidase biogenesis protein, predicted copper delivery
Locus tag: Shew_0122
Name: coxC
Funciton: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1)
coxB-coxA-coxZ-coxC -317 4.9 GTGATCTTGATCAA Shew_0125
Shewanella oneidensis MR-1
Position: -313
Score: 4.89002
Sequence: GTGATCTTGATCAA
Locus tag: SO4606
Name: coxB
Funciton: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1)
Locus tag: SO4607
Name: coxA
Funciton: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1)
Locus tag: SO4608
Name: coxZ
Funciton: Cytochrome c oxidase biogenesis protein, predicted copper delivery
Locus tag: SO4609
Name: coxC
Funciton: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1)
coxB-coxA-coxZ-coxC -313 4.9 GTGATCTTGATCAA SO4606
Shewanella pealeana ATCC 700345
Position: -349
Score: 4.89002
Sequence: GTGATCTTGATCAA
Position: -246
Score: 4.20371
Sequence: TAGATCCTGATCAA
Locus tag: Spea_3999
Name: coxB
Funciton: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1)
Locus tag: Spea_4000
Name: coxA
Funciton: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1)
Locus tag: Spea_4001
Name: coxZ
Funciton: Cytochrome c oxidase biogenesis protein, predicted copper delivery
Locus tag: Spea_4002
Name: coxC
Funciton: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1)
coxB-coxA-coxZ-coxC -349 4.9 GTGATCTTGATCAA Spea_3999
-246 4.2 TAGATCCTGATCAA
Shewanella piezotolerans WP3
Position: -366
Score: 4.89002
Sequence: GTGATCTTGATCAA
Locus tag: swp_4823
Name: coxB
Funciton: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1)
Locus tag: swp_4824
Name: coxA
Funciton: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1)
Locus tag: swp_4825
Name: coxZ
Funciton: Cytochrome c oxidase biogenesis protein, predicted copper delivery
Locus tag: swp_4826
Name: coxC
Funciton: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1)
coxB-coxA-coxZ-coxC -366 4.9 GTGATCTTGATCAA swp_4823
Shewanella putrefaciens CN-32
Position: -305
Score: 4.89002
Sequence: GTGATCTTGATCAA
Locus tag: Sputcn32_3782
Name: coxB
Funciton: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1)
Locus tag: Sputcn32_3783
Name: coxA
Funciton: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1)
Locus tag: Sputcn32_3784
Name: coxZ
Funciton: Cytochrome c oxidase biogenesis protein, predicted copper delivery
Locus tag: Sputcn32_3785
Name: coxC
Funciton: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1)
coxB-coxA-coxZ-coxC -305 4.9 GTGATCTTGATCAA Sputcn32_3782
Shewanella sediminis HAW-EB3
Position: -339
Score: 5.23445
Sequence: TTGATCTTGATCAA
Locus tag: Ssed_0198
Name: coxB
Funciton: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1)
Locus tag: Ssed_0197
Name: coxA
Funciton: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1)
Locus tag: Ssed_0196
Name: coxZ
Funciton: Cytochrome c oxidase biogenesis protein, predicted copper delivery
Locus tag: Ssed_0195
Name: coxC
Funciton: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1)
coxB-coxA-coxZ-coxC -339 5.2 TTGATCTTGATCAA Ssed_0198
Shewanella sp ANA-3
Position: -314
Score: 4.89002
Sequence: GTGATCTTGATCAA
Locus tag: Shewana3_3991
Name: coxB
Funciton: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1)
Locus tag: Shewana3_3992
Name: coxA
Funciton: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1)
Locus tag: Shewana3_3993
Name: coxZ
Funciton: Cytochrome c oxidase biogenesis protein, predicted copper delivery
Locus tag: Shewana3_3994
Name: coxC
Funciton: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1)
coxB-coxA-coxZ-coxC -314 4.9 GTGATCTTGATCAA Shewana3_3991
Shewanella sp MR-4
Position: -314
Score: 4.89002
Sequence: GTGATCTTGATCAA
Locus tag: Shewmr4_3791
Name: coxB
Funciton: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1)
Locus tag: Shewmr4_3792
Name: coxA
Funciton: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1)
Locus tag: Shewmr4_3793
Name: coxZ
Funciton: Cytochrome c oxidase biogenesis protein, predicted copper delivery
Locus tag: Shewmr4_3794
Name: coxC
Funciton: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1)
coxB-coxA-coxZ-coxC -314 4.9 GTGATCTTGATCAA Shewmr4_3791
Shewanella sp MR-7
Position: -313
Score: 4.89002
Sequence: GTGATCTTGATCAA
Locus tag: Shewmr7_3864
Name: coxB
Funciton: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1)
Locus tag: Shewmr7_3865
Name: coxA
Funciton: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1)
Locus tag: Shewmr7_3866
Name: coxZ
Funciton: Cytochrome c oxidase biogenesis protein, predicted copper delivery
Locus tag: Shewmr7_3867
Name: coxC
Funciton: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1)
coxB-coxA-coxZ-coxC -313 4.9 GTGATCTTGATCAA Shewmr7_3864
Shewanella sp W3-18-1
Position: -305
Score: 4.89002
Sequence: GTGATCTTGATCAA
Locus tag: Sputw3181_0133
Name: coxB
Funciton: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1)
Locus tag: Sputw3181_0132
Name: coxA
Funciton: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1)
Locus tag: Sputw3181_0131
Name: coxZ
Funciton: Cytochrome c oxidase biogenesis protein, predicted copper delivery
Locus tag: Sputw3181_0130
Name: coxC
Funciton: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1)
coxB-coxA-coxZ-coxC -305 4.9 GTGATCTTGATCAA Sputw3181_0133
Shewanella woodyi ATCC 51908
Position: -337
Score: 4.89002
Sequence: GTGATCTTGATCAA
Locus tag: Swoo_0178
Name: coxB
Funciton: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1)
Locus tag: Swoo_0177
Name: coxA
Funciton: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1)
Locus tag: Swoo_0176
Name: coxZ
Funciton: Cytochrome c oxidase biogenesis protein, predicted copper delivery
Locus tag: Swoo_0175
Name: coxC
Funciton: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1)
coxB-coxA-coxZ-coxC -337 4.9 GTGATCTTGATCAA Swoo_0178
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