Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rbsR gene

Properties
Regulog: RbsR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Ribose utilization
Effector: Ribose
Phylum: Firmicutes
Built upon 18 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Lactobacillus casei ATCC 334
Position: -45
Score: 6.73597
Sequence: TAAGTAAAACGTTTTACCTA
Locus tag: LSEI_0306
Name: rbsR
Funciton: Transcriptional repressor of ribose utilization, LacI family
Locus tag: LSEI_0307
Name: rbsD
Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
Locus tag: LSEI_0308
Name: rbsA
Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: LSEI_0309
Name: rbsC
Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: LSEI_0310
Name: rbsB
Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
rbsR-rbsD-rbsA-rbsC-rbsB -45 6.7 TAAGTAAAACGTTTTACCTA LSEI_0306
Lactobacillus fermentum IFO 3956
Position: -44
Score: 5.98689
Sequence: TTAGTAAACTGTTTTATTAA
Locus tag: LAF_1343
Name: rbsR
Funciton: Transcriptional repressor of ribose utilization, LacI family
rbsR -44 6 TTAGTAAACTGTTTTATTAA LAF_1343
Lactobacillus reuteri JCM 1112
Position: -35
Score: 4.66901
Sequence: TAGATAAAACTGTTTACTAA
Locus tag: LAR_1219
Name: rbsR
Funciton: Transcriptional repressor of ribose utilization, LacI family
Locus tag: LAR_1218
Name: rbsK
Funciton: Ribokinase (EC 2.7.1.15)
rbsR-rbsK -35 4.7 TAGATAAAACTGTTTACTAA LAR_1219
Lactobacillus rhamnosus GG
Position: -46
Score: 6.73597
Sequence: TAAGTAAAACGTTTTACCTA
Locus tag: LGG_00372
Name: rbsR
Funciton: Transcriptional repressor of ribose utilization, LacI family
Locus tag: LGG_00373
Name: rbsK
Funciton: Ribokinase (EC 2.7.1.15)
rbsR-rbsK -46 6.7 TAAGTAAAACGTTTTACCTA LGG_00372
Lactobacillus sakei subsp. sakei 23K
Position: -49
Score: 6.91678
Sequence: TTAGTAAAACGTTTTACTAA
Locus tag: LSA0200
Name: rbsU
Funciton: Putative ribose uptake protein RbsU, GRP transporter family (TC 2.A.7.5)
Locus tag: LSA0201
Name: rbsD
Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
Locus tag: LSA0202
Name: rbsK
Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: LSA0203
Name: rbsR
Funciton: Transcriptional repressor of ribose utilization, LacI family
rbsU-rbsD-rbsK-rbsR -49 6.9 TTAGTAAAACGTTTTACTAA LSA0200
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Position: -123
Score: 6.56921
Sequence: TTAGTAAAACGTTTAACCAA
Locus tag: LEUM_0795
Name: rbsR
Funciton: Transcriptional repressor of ribose utilization, LacI family
rbsR -123 6.6 TTAGTAAAACGTTTAACCAA LEUM_0795
Oenococcus oeni PSU-1
Position: -47
Score: 5.11961
Sequence: TGTTGTAAACGTTTTAAGAA
Locus tag: OEOE_0146
Name: rbsR
Funciton: Transcriptional repressor of ribose utilization, LacI family
rbsR -47 5.1 TGTTGTAAACGTTTTAAGAA OEOE_0146
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