Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing yciC gene

Properties
Regulog: Zur - Actinobacteria
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Actinobacteria
Built upon 69 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Actinosynnema mirum DSM 43827
Position: -53
Score: 5.52795
Sequence: AAATGACAATCGTTTCCGTTA
Locus tag: Amir_4416
Name: yciC
Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Locus tag: Amir_4415
Name: rpmE2
Funciton: LSU ribosomal protein L31p
Locus tag: Amir_4414
Name: rpmF2
Funciton: LSU ribosomal protein L32p
yciC-rpmE2-rpmF2 -53 5.5 AAATGACAATCGTTTCCGTTA Amir_4416
Saccharopolyspora erythraea NRRL 2338
Position: -66
Score: 5.46565
Sequence: TAACGACATCCGTTTTCATTA
Position: -12
Score: 4.95307
Sequence: AAATGAAAACCGTTGCCGACT
Locus tag: SACE_0755
Name: yciC
Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Locus tag: SACE_0756
Name: rpmE2
Funciton: LSU ribosomal protein L31p
Locus tag: SACE_0757
Name: rpmF2
Funciton: LSU ribosomal protein L32p
yciC-rpmE2-rpmF2 -66 5.5 TAACGACATCCGTTTTCATTA SACE_0755
-12 5 AAATGAAAACCGTTGCCGACT
Streptomyces coelicolor A3(2)
Position: -31
Score: 5.60737
Sequence: TAATGGAATTCATTTTCAGTA
Locus tag: SCO3428
Name: rpmG2
Funciton: LSU ribosomal protein L33p
Locus tag: SCO3427
Name: rpmE2
Funciton: LSU ribosomal protein L31p
Locus tag: SCO3426
Name: yciC
Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Locus tag: SCO3425
Name: rpsR2
Funciton: SSU ribosomal protein S18p
rpmG2-rpmE2-yciC-rpsR2 -31 5.6 TAATGGAATTCATTTTCAGTA SCO3428