Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rpmE2 gene

Properties
Regulog: Zur - Mycobacteriaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Actinobacteria
Built upon 70 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Mycobacterium abscessus ATCC 19977
Position: -106
Score: 5.32049
Sequence: TAATGGGAATCATTTTCGACA
Position: -51
Score: 5.78413
Sequence: TAATGAAAATCGTTTGCATTT
Locus tag: MAB_0335
Name: yciC
Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Locus tag: MAB_0336
Name: rpmE2
Funciton: 50S ribosomal protein L31
yciC-rpmE2 -106 5.3 TAATGGGAATCATTTTCGACA MAB_0335
-51 5.8 TAATGAAAATCGTTTGCATTT
Mycobacterium marinum M
Position: -107
Score: 5.80851
Sequence: TATTGAAAATCATTTTCGACA
Position: -51
Score: 6.43811
Sequence: TAATGAAAATCGTTTTCAATA
Locus tag: MMAR_0293
Name: yciC
Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Locus tag: MMAR_0294
Name: rpmE2
Funciton: 50S ribosomal protein L31
yciC-rpmE2 -107 5.8 TATTGAAAATCATTTTCGACA MMAR_0293
-51 6.4 TAATGAAAATCGTTTTCAATA
Mycobacterium smegmatis str. MC2 155
Position: -54
Score: 6.3073
Sequence: TAATGACAATCGTTTTCAATA
Locus tag: MSMEG_6069
Name: yciC
Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Locus tag: MSMEG_6070
Name: rpmE2
Funciton: 50S ribosomal protein L31
yciC-rpmE2 -54 6.3 TAATGACAATCGTTTTCAATA MSMEG_6069
Mycobacterium vanbaalenii PYR-1
Position: -40
Score: 6.23547
Sequence: TAATGGAAATGGTTTTCAATA
Locus tag: Mvan_5333
Name: rpmE2
Funciton: 50S ribosomal protein L31
rpmE2 -40 6.2 TAATGGAAATGGTTTTCAATA Mvan_5333
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