Orthologous regulated operons containing omcA gene
| Regulog: | Crp - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella amazonensis SB2B | ||||
|
Position: -189
Score: 3.93967 Sequence: CGGCGTGACACTCATCACACTT
Locus tag: Sama_1213
Name: mtrD Funciton: periplasmic decaheme cytochrome c, MtrD
Locus tag: Sama_1212
Name: mtrE Funciton: outer membrane protein, MtrE
Locus tag: Sama_1211
Name: mtrF Funciton: surface localized decaheme cytochrome c lipoprotein, MtrF
Locus tag: Sama_1210
Name: omcA Funciton: surface localized decaheme cytochrome c lipoprotein, OmcA |
||||
| mtrD-mtrE-mtrF-omcA | -189 | 3.9 | CGGCGTGACACTCATCACACTT | Sama_1213 |
| Shewanella baltica OS155 | ||||
|
Position: -304
Score: 3.76559 Sequence: TTATGTGACAAAAATACCAATG
Position: -181
Score: 4.77529 Sequence: AAACGTGATCAACATCACGCTT
Locus tag: Sbal_1593
Name: mtrD Funciton: periplasmic decaheme cytochrome c, MtrD
Locus tag: Sbal_1592
Name: mtrE Funciton: outer membrane protein, MtrE
Locus tag: Sbal_1591
Name: mtrF Funciton: surface localized decaheme cytochrome c lipoprotein, MtrF
Locus tag: Sbal_1590
Name: omcA Funciton: surface localized decaheme cytochrome c lipoprotein, OmcA |
||||
| mtrD-mtrE-mtrF-omcA | -304 | 3.8 | TTATGTGACAAAAATACCAATG | Sbal_1593 |
| -181 | 4.8 | AAACGTGATCAACATCACGCTT | ||
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -305
Score: 4.5247 Sequence: TTATGTGATAAATATCTCAACT
Position: -184
Score: 4.56732 Sequence: AAACTTGACACAGATCACACTT
Locus tag: Shal_2778
Name: mtrD Funciton: periplasmic decaheme cytochrome c, MtrD
Locus tag: Shal_2779
Name: mtrE Funciton: outer membrane protein, MtrE
Locus tag: Shal_2780
Name: mtrF Funciton: surface localized decaheme cytochrome c lipoprotein, MtrF
Locus tag: Shal_2781
Name: omcA Funciton: surface localized decaheme cytochrome c lipoprotein, OmcA |
||||
| mtrD-mtrE-mtrF-omcA | -305 | 4.5 | TTATGTGATAAATATCTCAACT | Shal_2778 |
| -184 | 4.6 | AAACTTGACACAGATCACACTT | ||
| Shewanella loihica PV-4 | ||||
|
Position: -260
Score: 4.45471 Sequence: TTATGTGACAGATATCTCAATC
Position: -170
Score: 5.28415 Sequence: CAACGTGATCTAGATCACATAT
Locus tag: Shew_2519
Name: mtrD Funciton: periplasmic decaheme cytochrome c, MtrD
Locus tag: Shew_2520
Name: mtrE Funciton: outer membrane protein, MtrE
Locus tag: Shew_2521
Name: mtrF Funciton: surface localized decaheme cytochrome c lipoprotein, MtrF
Locus tag: Shew_2522
Name: omcA Funciton: surface localized decaheme cytochrome c lipoprotein, OmcA |
||||
| mtrD-mtrE-mtrF-omcA | -260 | 4.5 | TTATGTGACAGATATCTCAATC | Shew_2519 |
| -170 | 5.3 | CAACGTGATCTAGATCACATAT | ||
| Shewanella oneidensis MR-1 | ||||
|
Position: -339
Score: 3.80688 Sequence: TTATGTGACAAAAATCTCTATG
Locus tag: SO1782
Name: mtrD Funciton: periplasmic decaheme cytochrome c, MtrD
Locus tag: SO1781
Name: mtrE Funciton: outer membrane protein, MtrE
Locus tag: SO1780
Name: mtrF Funciton: surface localized decaheme cytochrome c lipoprotein, MtrF
Locus tag: SO1779
Name: omcA Funciton: surface localized decaheme cytochrome c lipoprotein, OmcA |
||||
| mtrD-mtrE-mtrF-omcA | -339 | 3.8 | TTATGTGACAAAAATCTCTATG | SO1782 |
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -286
Score: 4.12663 Sequence: TTATGTGACAAAACTCTCAACT
Position: -197
Score: 5.43359 Sequence: AAGTGTGATACGCATCACATAA
Locus tag: Spea_2692
Name: mtrD Funciton: periplasmic decaheme cytochrome c, MtrD
Locus tag: Spea_2693
Name: mtrE Funciton: outer membrane protein, MtrE
Locus tag: Spea_2694
Name: mtrF Funciton: surface localized decaheme cytochrome c lipoprotein, MtrF
Locus tag: Spea_2695
Name: omcA Funciton: surface localized decaheme cytochrome c lipoprotein, OmcA |
||||
| mtrD-mtrE-mtrF-omcA | -286 | 4.1 | TTATGTGACAAAACTCTCAACT | Spea_2692 |
| -197 | 5.4 | AAGTGTGATACGCATCACATAA | ||
| Shewanella piezotolerans WP3 | ||||
|
Position: -308
Score: 4.16651 Sequence: TTATGTGACAAATCTCTCAACT
Position: -185
Score: 4.56511 Sequence: CAGTGTGACGTAGATCACGCTT
Locus tag: swp_3272
Name: mtrD Funciton: periplasmic decaheme cytochrome c, MtrD
Locus tag: swp_3273
Name: mtrE Funciton: outer membrane protein, MtrE
Locus tag: swp_3274
Name: mtrF Funciton: surface localized decaheme cytochrome c lipoprotein, MtrF
Locus tag: swp_3275
Name: omcA Funciton: surface localized decaheme cytochrome c lipoprotein, OmcA |
||||
| mtrD-mtrE-mtrF-omcA | -308 | 4.2 | TTATGTGACAAATCTCTCAACT | swp_3272 |
| -185 | 4.6 | CAGTGTGACGTAGATCACGCTT | ||
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -291
Score: 4.01107 Sequence: TTATGTGACAAAAGTCTCAACT
Position: -174
Score: 4.76284 Sequence: TAGCGTGACCAAGATCACACTT
Locus tag: Ssed_1530
Name: mtrD Funciton: periplasmic decaheme cytochrome c, MtrD
Locus tag: Ssed_1529
Name: mtrE Funciton: outer membrane protein, MtrE
Locus tag: Ssed_1528
Name: mtrF Funciton: surface localized decaheme cytochrome c lipoprotein, MtrF
Locus tag: Ssed_1527
Name: omcA Funciton: surface localized decaheme cytochrome c lipoprotein, OmcA |
||||
| mtrD-mtrE-mtrF-omcA | -291 | 4 | TTATGTGACAAAAGTCTCAACT | Ssed_1530 |
| -174 | 4.8 | TAGCGTGACCAAGATCACACTT | ||
| Shewanella sp ANA-3 | ||||
|
Position: -295
Score: 4.35955 Sequence: TTATGTGACAAAAATCTCAATG
Position: -172
Score: 4.26694 Sequence: AAGTGAGAACAAGATCACACTT
Locus tag: Shewana3_2672
Name: mtrD Funciton: periplasmic decaheme cytochrome c, MtrD
Locus tag: Shewana3_2673
Name: mtrE Funciton: outer membrane protein, MtrE
Locus tag: Shewana3_2674
Name: mtrF Funciton: surface localized decaheme cytochrome c lipoprotein, MtrF
Locus tag: Shewana3_2675
Name: omcA Funciton: surface localized decaheme cytochrome c lipoprotein, OmcA |
||||
| mtrD-mtrE-mtrF-omcA | -295 | 4.4 | TTATGTGACAAAAATCTCAATG | Shewana3_2672 |
| -172 | 4.3 | AAGTGAGAACAAGATCACACTT | ||
| Shewanella sp MR-4 | ||||
|
Position: -295
Score: 4.35955 Sequence: TTATGTGACAAAAATCTCAATG
Position: -172
Score: 4.26694 Sequence: AAGTGAGAACAAGATCACACTT
Locus tag: Shewmr4_2506
Name: mtrD Funciton: periplasmic decaheme cytochrome c, MtrD
Locus tag: Shewmr4_2507
Name: mtrE Funciton: outer membrane protein, MtrE
Locus tag: Shewmr4_2508
Name: mtrF Funciton: surface localized decaheme cytochrome c lipoprotein, MtrF
Locus tag: Shewmr4_2509
Name: omcA Funciton: surface localized decaheme cytochrome c lipoprotein, OmcA |
||||
| mtrD-mtrE-mtrF-omcA | -295 | 4.4 | TTATGTGACAAAAATCTCAATG | Shewmr4_2506 |
| -172 | 4.3 | AAGTGAGAACAAGATCACACTT | ||
| Shewanella sp MR-7 | ||||
|
Position: -295
Score: 4.35955 Sequence: TTATGTGACAAAAATCTCAATG
Position: -172
Score: 4.26694 Sequence: AAGTGAGAACAAGATCACACTT
Locus tag: Shewmr7_2574
Name: mtrD Funciton: periplasmic decaheme cytochrome c, MtrD
Locus tag: Shewmr7_2575
Name: mtrE Funciton: outer membrane protein, MtrE
Locus tag: Shewmr7_2576
Name: mtrF Funciton: surface localized decaheme cytochrome c lipoprotein, MtrF
Locus tag: Shewmr7_2577
Name: omcA Funciton: surface localized decaheme cytochrome c lipoprotein, OmcA |
||||
| mtrD-mtrE-mtrF-omcA | -295 | 4.4 | TTATGTGACAAAAATCTCAATG | Shewmr7_2574 |
| -172 | 4.3 | AAGTGAGAACAAGATCACACTT | ||