Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing mtrA gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -230
Score: 3.85699
Sequence: TTTTTTGATCTGAAACAGCTTT
Position: -178
Score: 3.63907
Sequence: TAGCCGGATCCAGTTCACACAT
Locus tag: Sama_1208
Name: mtrC
Funciton: surface localized decaheme cytochrome c lipoprotein, MtrC
Locus tag: Sama_1207
Name: mtrA
Funciton: periplasmic decaheme cytochrome c, MtrA
Locus tag: Sama_1206
Name: mtrB
Funciton: outer membrane protein, MtrB
mtrC-mtrA-mtrB -230 3.9 TTTTTTGATCTGAAACAGCTTT Sama_1208
-178 3.6 TAGCCGGATCCAGTTCACACAT
Shewanella baltica OS155
Position: -190
Score: 3.51764
Sequence: TAGAAAGATCCAAGTCACACAT
Locus tag: Sbal_1589
Name: mtrC
Funciton: surface localized decaheme cytochrome c lipoprotein, MtrC
Locus tag: Sbal_1588
Name: mtrA
Funciton: periplasmic decaheme cytochrome c, MtrA
Locus tag: Sbal_1587
Name: mtrB
Funciton: outer membrane protein, MtrB
mtrC-mtrA-mtrB -190 3.5 TAGAAAGATCCAAGTCACACAT Sbal_1589
Shewanella frigidimarina NCIMB 400
Position: -164
Score: 3.7709
Sequence: TAGGCTGATCATCATCACACAA
Locus tag: Sfri_2637
Name: mtrC
Funciton: surface localized decaheme cytochrome c lipoprotein, MtrC
Locus tag: Sfri_2638
Name: mtrA
Funciton: periplasmic decaheme cytochrome c, MtrA
Locus tag: Sfri_2639
Name: mtrB
Funciton: outer membrane protein, MtrB
mtrC-mtrA-mtrB -164 3.8 TAGGCTGATCATCATCACACAA Sfri_2637
Shewanella halifaxensis HAW-EB4
Position: -264
Score: 4.00452
Sequence: TTTTATTACATTTATCACGTAT
Locus tag: Shal_2784
Name: mtrC
Funciton: surface localized decaheme cytochrome c lipoprotein, MtrC
Locus tag: Shal_2785
Name: mtrA
Funciton: periplasmic decaheme cytochrome c, MtrA
Locus tag: Shal_2786
Name: mtrB
Funciton: outer membrane protein, MtrB
mtrC-mtrA-mtrB -264 4 TTTTATTACATTTATCACGTAT Shal_2784
Shewanella loihica PV-4
Position: -179
Score: 3.59173
Sequence: TAGAAAGATCTCGGTCACACAT
Locus tag: Shew_2525
Name: mtrC
Funciton: surface localized decaheme cytochrome c lipoprotein, MtrC
Locus tag: Shew_2526
Name: mtrA
Funciton: periplasmic decaheme cytochrome c, MtrA
Locus tag: Shew_2527
Name: mtrB
Funciton: outer membrane protein, MtrB
mtrC-mtrA-mtrB -179 3.6 TAGAAAGATCTCGGTCACACAT Shew_2525
Shewanella oneidensis MR-1
Position: -248
Score: 3.6914
Sequence: TGTTGTTTTTTTGCTCTCAATT
Position: -190
Score: 3.51764
Sequence: TAGAAAGATCCAAGTCACACAT
Locus tag: SO1778
Name: mtrC
Funciton: surface localized decaheme cytochrome c lipoprotein, MtrC
Locus tag: SO1777
Name: mtrA
Funciton: periplasmic decaheme cytochrome c, MtrA
Locus tag: SO1776
Name: mtrB
Funciton: outer membrane protein, MtrB
mtrC-mtrA-mtrB -248 3.7 TGTTGTTTTTTTGCTCTCAATT SO1778
-190 3.5 TAGAAAGATCCAAGTCACACAT
Shewanella putrefaciens CN-32
Position: -190
Score: 3.51764
Sequence: TAGAAAGATCCAAGTCACACAT
Locus tag: Sputcn32_1478
Name: mtrC
Funciton: surface localized decaheme cytochrome c lipoprotein, MtrC
Locus tag: Sputcn32_1477
Name: mtrA
Funciton: periplasmic decaheme cytochrome c, MtrA
Locus tag: Sputcn32_1476
Name: mtrB
Funciton: outer membrane protein, MtrB
mtrC-mtrA-mtrB -190 3.5 TAGAAAGATCCAAGTCACACAT Sputcn32_1478
Shewanella sediminis HAW-EB3
Position: -191
Score: 4.01918
Sequence: TAGGCTGATCTAGGTCACACAT
Locus tag: Ssed_1525
Name: mtrC
Funciton: surface localized decaheme cytochrome c lipoprotein, MtrC
Locus tag: Ssed_1524
Name: mtrA
Funciton: periplasmic decaheme cytochrome c, MtrA
Locus tag: Ssed_1523
Name: mtrB
Funciton: outer membrane protein, MtrB
mtrC-mtrA-mtrB -191 4 TAGGCTGATCTAGGTCACACAT Ssed_1525
Shewanella sp ANA-3
Position: -189
Score: 3.51764
Sequence: TAGAAAGATCCAAGTCACACAT
Locus tag: Shewana3_2676
Name: mtrC
Funciton: surface localized decaheme cytochrome c lipoprotein, MtrC
Locus tag: Shewana3_2677
Name: mtrA
Funciton: periplasmic decaheme cytochrome c, MtrA
Locus tag: Shewana3_2678
Name: mtrB
Funciton: outer membrane protein, MtrB
mtrC-mtrA-mtrB -189 3.5 TAGAAAGATCCAAGTCACACAT Shewana3_2676
Shewanella sp MR-4
Position: -189
Score: 3.51764
Sequence: TAGAAAGATCCAAGTCACACAT
Locus tag: Shewmr4_2510
Name: mtrC
Funciton: surface localized decaheme cytochrome c lipoprotein, MtrC
Locus tag: Shewmr4_2511
Name: mtrA
Funciton: periplasmic decaheme cytochrome c, MtrA
Locus tag: Shewmr4_2512
Name: mtrB
Funciton: outer membrane protein, MtrB
mtrC-mtrA-mtrB -189 3.5 TAGAAAGATCCAAGTCACACAT Shewmr4_2510
Shewanella sp MR-7
Position: -189
Score: 3.51764
Sequence: TAGAAAGATCCAAGTCACACAT
Locus tag: Shewmr7_2578
Name: mtrC
Funciton: surface localized decaheme cytochrome c lipoprotein, MtrC
Locus tag: Shewmr7_2579
Name: mtrA
Funciton: periplasmic decaheme cytochrome c, MtrA
Locus tag: Shewmr7_2580
Name: mtrB
Funciton: outer membrane protein, MtrB
mtrC-mtrA-mtrB -189 3.5 TAGAAAGATCCAAGTCACACAT Shewmr7_2578
Shewanella sp W3-18-1
Position: -190
Score: 3.51764
Sequence: TAGAAAGATCCAAGTCACACAT
Locus tag: Sputw3181_2623
Name: mtrC
Funciton: surface localized decaheme cytochrome c lipoprotein, MtrC
Locus tag: Sputw3181_2624
Name: mtrA
Funciton: periplasmic decaheme cytochrome c, MtrA
Locus tag: Sputw3181_2625
Name: mtrB
Funciton: outer membrane protein, MtrB
mtrC-mtrA-mtrB -190 3.5 TAGAAAGATCCAAGTCACACAT Sputw3181_2623
Shewanella woodyi ATCC 51908
Position: -288
Score: 3.71936
Sequence: ATGAGTTACAACTTTCACACAT
Locus tag: Swoo_3125
Name: mtrC
Funciton: surface localized decaheme cytochrome c lipoprotein, MtrC
Locus tag: Swoo_3126
Name: mtrA
Funciton: periplasmic decaheme cytochrome c, MtrA
Locus tag: Swoo_3127
Name: mtrB
Funciton: outer membrane protein, MtrB
mtrC-mtrA-mtrB -288 3.7 ATGAGTTACAACTTTCACACAT Swoo_3125
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