Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ygbA gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -94
Score: 3.59739
Sequence: TTTTGTGCGCATCTTCATGCTT
Locus tag: Sama_3326
Name: ygbA
Funciton: nitrosative stress induced protein
ygbA -94 3.6 TTTTGTGCGCATCTTCATGCTT Sama_3326
Shewanella baltica OS155
Position: -96
Score: 4.05487
Sequence: TTTTGTGCGCACCTTCATAAAT
Locus tag: Sbal_4067
Name: ygbA
Funciton: nitrosative stress induced protein
ygbA -96 4.1 TTTTGTGCGCACCTTCATAAAT Sbal_4067
Shewanella frigidimarina NCIMB 400
Position: -142
Score: 3.98547
Sequence: TTTTGCGATCCCAACCTCAAAA
Locus tag: Sfri_0404
Name: ygbA
Funciton: nitrosative stress induced protein
ygbA -142 4 TTTTGCGATCCCAACCTCAAAA Sfri_0404
Shewanella halifaxensis HAW-EB4
Position: -96
Score: 3.99827
Sequence: TTTTGTGCACATCTTCAAACTT
Locus tag: Shal_3986
Name: ygbA
Funciton: nitrosative stress induced protein
ygbA -96 4 TTTTGTGCACATCTTCAAACTT Shal_3986
Shewanella loihica PV-4
Position: -96
Score: 4.06993
Sequence: TTTTGTGCGCATCTTCATAATT
Locus tag: Shew_0259
Name: ygbA
Funciton: nitrosative stress induced protein
ygbA -96 4.1 TTTTGTGCGCATCTTCATAATT Shew_0259
Shewanella oneidensis MR-1
Position: -97
Score: 4.05487
Sequence: TTTTGTGCGCACCTTCATAAAT
Locus tag: SO0324
Name: ygbA
Funciton: nitrosative stress induced protein
ygbA -97 4.1 TTTTGTGCGCACCTTCATAAAT SO0324
Shewanella pealeana ATCC 700345
Position: -96
Score: 3.89312
Sequence: TTTTGTGCACATCTTCAAAGTT
Locus tag: Spea_0303
Name: ygbA
Funciton: nitrosative stress induced protein
ygbA -96 3.9 TTTTGTGCACATCTTCAAAGTT Spea_0303
Shewanella piezotolerans WP3
Position: -96
Score: 4.03726
Sequence: TTTTGTGCGCACCTTCAAACTT
Locus tag: swp_2171
Name: ygbA
Funciton: nitrosative stress induced protein
ygbA -96 4 TTTTGTGCGCACCTTCAAACTT swp_2171
Shewanella putrefaciens CN-32
Position: -96
Score: 4.05487
Sequence: TTTTGTGCGCACCTTCATAAAT
Locus tag: Sputcn32_3663
Name: ygbA
Funciton: nitrosative stress induced protein
ygbA -96 4.1 TTTTGTGCGCACCTTCATAAAT Sputcn32_3663
Shewanella sediminis HAW-EB3
Position: -187
Score: 3.90078
Sequence: TTTTGTGCACATCTTCATACTT
Locus tag: Ssed_4199
Name: ygbA
Funciton: nitrosative stress induced protein
ygbA -187 3.9 TTTTGTGCACATCTTCATACTT Ssed_4199
Shewanella sp ANA-3
Position: -97
Score: 4.06993
Sequence: TTTTGTGCGCATCTTCATAAAT
Locus tag: Shewana3_3845
Name: ygbA
Funciton: nitrosative stress induced protein
ygbA -97 4.1 TTTTGTGCGCATCTTCATAAAT Shewana3_3845
Shewanella sp MR-4
Position: -97
Score: 4.06993
Sequence: TTTTGTGCGCATCTTCATAAAT
Locus tag: Shewmr4_3649
Name: ygbA
Funciton: nitrosative stress induced protein
ygbA -97 4.1 TTTTGTGCGCATCTTCATAAAT Shewmr4_3649
Shewanella sp MR-7
Position: -97
Score: 4.06993
Sequence: TTTTGTGCGCATCTTCATAAAT
Locus tag: Shewmr7_0295
Name: ygbA
Funciton: nitrosative stress induced protein
ygbA -97 4.1 TTTTGTGCGCATCTTCATAAAT Shewmr7_0295
Shewanella sp W3-18-1
Position: -96
Score: 4.05487
Sequence: TTTTGTGCGCACCTTCATAAAT
Locus tag: Sputw3181_3804
Name: ygbA
Funciton: nitrosative stress induced protein
ygbA -96 4.1 TTTTGTGCGCACCTTCATAAAT Sputw3181_3804
Shewanella woodyi ATCC 51908
Position: -82
Score: 3.43868
Sequence: TTCTGTGCGCACCTTCATAGAT
Locus tag: Swoo_0395
Name: ygbA
Funciton: nitrosative stress induced protein
ygbA -82 3.4 TTCTGTGCGCACCTTCATAGAT Swoo_0395
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