Orthologous regulated operons containing ygbA gene
| Regulog: | Crp - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella amazonensis SB2B | ||||
|
Position: -94
Score: 3.59739 Sequence: TTTTGTGCGCATCTTCATGCTT
Locus tag: Sama_3326
Name: ygbA Funciton: nitrosative stress induced protein |
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| ygbA | -94 | 3.6 | TTTTGTGCGCATCTTCATGCTT | Sama_3326 |
| Shewanella baltica OS155 | ||||
|
Position: -96
Score: 4.05487 Sequence: TTTTGTGCGCACCTTCATAAAT
Locus tag: Sbal_4067
Name: ygbA Funciton: nitrosative stress induced protein |
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| ygbA | -96 | 4.1 | TTTTGTGCGCACCTTCATAAAT | Sbal_4067 |
| Shewanella frigidimarina NCIMB 400 | ||||
|
Position: -142
Score: 3.98547 Sequence: TTTTGCGATCCCAACCTCAAAA
Locus tag: Sfri_0404
Name: ygbA Funciton: nitrosative stress induced protein |
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| ygbA | -142 | 4 | TTTTGCGATCCCAACCTCAAAA | Sfri_0404 |
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -96
Score: 3.99827 Sequence: TTTTGTGCACATCTTCAAACTT
Locus tag: Shal_3986
Name: ygbA Funciton: nitrosative stress induced protein |
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| ygbA | -96 | 4 | TTTTGTGCACATCTTCAAACTT | Shal_3986 |
| Shewanella loihica PV-4 | ||||
|
Position: -96
Score: 4.06993 Sequence: TTTTGTGCGCATCTTCATAATT
Locus tag: Shew_0259
Name: ygbA Funciton: nitrosative stress induced protein |
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| ygbA | -96 | 4.1 | TTTTGTGCGCATCTTCATAATT | Shew_0259 |
| Shewanella oneidensis MR-1 | ||||
|
Position: -97
Score: 4.05487 Sequence: TTTTGTGCGCACCTTCATAAAT
Locus tag: SO0324
Name: ygbA Funciton: nitrosative stress induced protein |
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| ygbA | -97 | 4.1 | TTTTGTGCGCACCTTCATAAAT | SO0324 |
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -96
Score: 3.89312 Sequence: TTTTGTGCACATCTTCAAAGTT
Locus tag: Spea_0303
Name: ygbA Funciton: nitrosative stress induced protein |
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| ygbA | -96 | 3.9 | TTTTGTGCACATCTTCAAAGTT | Spea_0303 |
| Shewanella piezotolerans WP3 | ||||
|
Position: -96
Score: 4.03726 Sequence: TTTTGTGCGCACCTTCAAACTT
Locus tag: swp_2171
Name: ygbA Funciton: nitrosative stress induced protein |
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| ygbA | -96 | 4 | TTTTGTGCGCACCTTCAAACTT | swp_2171 |
| Shewanella putrefaciens CN-32 | ||||
|
Position: -96
Score: 4.05487 Sequence: TTTTGTGCGCACCTTCATAAAT
Locus tag: Sputcn32_3663
Name: ygbA Funciton: nitrosative stress induced protein |
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| ygbA | -96 | 4.1 | TTTTGTGCGCACCTTCATAAAT | Sputcn32_3663 |
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -187
Score: 3.90078 Sequence: TTTTGTGCACATCTTCATACTT
Locus tag: Ssed_4199
Name: ygbA Funciton: nitrosative stress induced protein |
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| ygbA | -187 | 3.9 | TTTTGTGCACATCTTCATACTT | Ssed_4199 |
| Shewanella sp ANA-3 | ||||
|
Position: -97
Score: 4.06993 Sequence: TTTTGTGCGCATCTTCATAAAT
Locus tag: Shewana3_3845
Name: ygbA Funciton: nitrosative stress induced protein |
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| ygbA | -97 | 4.1 | TTTTGTGCGCATCTTCATAAAT | Shewana3_3845 |
| Shewanella sp MR-4 | ||||
|
Position: -97
Score: 4.06993 Sequence: TTTTGTGCGCATCTTCATAAAT
Locus tag: Shewmr4_3649
Name: ygbA Funciton: nitrosative stress induced protein |
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| ygbA | -97 | 4.1 | TTTTGTGCGCATCTTCATAAAT | Shewmr4_3649 |
| Shewanella sp MR-7 | ||||
|
Position: -97
Score: 4.06993 Sequence: TTTTGTGCGCATCTTCATAAAT
Locus tag: Shewmr7_0295
Name: ygbA Funciton: nitrosative stress induced protein |
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| ygbA | -97 | 4.1 | TTTTGTGCGCATCTTCATAAAT | Shewmr7_0295 |
| Shewanella sp W3-18-1 | ||||
|
Position: -96
Score: 4.05487 Sequence: TTTTGTGCGCACCTTCATAAAT
Locus tag: Sputw3181_3804
Name: ygbA Funciton: nitrosative stress induced protein |
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| ygbA | -96 | 4.1 | TTTTGTGCGCACCTTCATAAAT | Sputw3181_3804 |
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -82
Score: 3.43868 Sequence: TTCTGTGCGCACCTTCATAGAT
Locus tag: Swoo_0395
Name: ygbA Funciton: nitrosative stress induced protein |
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| ygbA | -82 | 3.4 | TTCTGTGCGCACCTTCATAGAT | Swoo_0395 |