Orthologous regulated operons containing hmgA gene
| Regulog: | Crp - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella amazonensis SB2B | ||||
|
Position: -78
Score: 4.47858 Sequence: AATTGATACCCAGATCACATAT
Locus tag: Sama_1569
Name: hmgA Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
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| hmgA | -78 | 4.5 | AATTGATACCCAGATCACATAT | Sama_1569 |
| Shewanella baltica OS155 | ||||
|
Position: -144
Score: 3.52271 Sequence: TTTTTAGATTGAGATAACGGAT
Position: -88
Score: 3.95142 Sequence: AATTGATAACAAGATCACACTA
Locus tag: Sbal_2615
Name: hmgA Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
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| hmgA | -144 | 3.5 | TTTTTAGATTGAGATAACGGAT | Sbal_2615 |
| -88 | 4 | AATTGATAACAAGATCACACTA | ||
| Shewanella denitrificans OS217 | ||||
|
Position: -122
Score: 3.58168 Sequence: AATTGATAGCTAGATCACAACG
Locus tag: Sden_2162
Name: hmgA Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
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| hmgA | -122 | 3.6 | AATTGATAGCTAGATCACAACG | Sden_2162 |
| Shewanella frigidimarina NCIMB 400 | ||||
|
Position: -126
Score: 3.52118 Sequence: TTTGTTGATCTTTACCACTAAA
Position: -106
Score: 4.99586 Sequence: AATTGTAAGTTAGATCACATAT
Locus tag: Sfri_2326
Name: hmgA Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
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| hmgA | -126 | 3.5 | TTTGTTGATCTTTACCACTAAA | Sfri_2326 |
| -106 | 5 | AATTGTAAGTTAGATCACATAT | ||
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -63
Score: 3.9407 Sequence: AAATTAAAGCTAGATCACATTA
Locus tag: Shal_2409
Name: hmgA Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
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| hmgA | -63 | 3.9 | AAATTAAAGCTAGATCACATTA | Shal_2409 |
| Shewanella loihica PV-4 | ||||
|
Position: -61
Score: 5.10196 Sequence: AATTGTTACTTAGATCACATAA
Locus tag: Shew_2154
Name: hmgA Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
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| hmgA | -61 | 5.1 | AATTGTTACTTAGATCACATAA | Shew_2154 |
| Shewanella oneidensis MR-1 | ||||
|
Position: -92
Score: 3.81693 Sequence: AATTGATAAGAAGATCACAGTA
Locus tag: SO1963
Name: hmgA Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
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| hmgA | -92 | 3.8 | AATTGATAAGAAGATCACAGTA | SO1963 |
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -63
Score: 3.95532 Sequence: AAATTGAACCTAGATCACATTA
Locus tag: Spea_1874
Name: hmgA Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
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| hmgA | -63 | 4 | AAATTGAACCTAGATCACATTA | Spea_1874 |
| Shewanella piezotolerans WP3 | ||||
|
Position: -84
Score: 3.48834 Sequence: TTTTTTGCTGTTGTTAGCAACT
Position: -61
Score: 4.14896 Sequence: AATTGATAACAAGATCACATTA
Locus tag: swp_2870
Name: hmgA Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
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| hmgA | -84 | 3.5 | TTTTTTGCTGTTGTTAGCAACT | swp_2870 |
| -61 | 4.1 | AATTGATAACAAGATCACATTA | ||
| Shewanella putrefaciens CN-32 | ||||
|
Position: -66
Score: 4.14896 Sequence: AATTGATAACAAGATCACATAA
Locus tag: Sputcn32_1671
Name: hmgA Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
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| hmgA | -66 | 4.1 | AATTGATAACAAGATCACATAA | Sputcn32_1671 |
| Shewanella sp ANA-3 | ||||
|
Position: -144
Score: 3.88015 Sequence: TTTTTAGATTGAGATAACAGAT
Position: -88
Score: 3.92208 Sequence: AATTGATAAGAAGATCACACTA
Locus tag: Shewana3_2481
Name: hmgA Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
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| hmgA | -144 | 3.9 | TTTTTAGATTGAGATAACAGAT | Shewana3_2481 |
| -88 | 3.9 | AATTGATAAGAAGATCACACTA | ||
| Shewanella sp MR-4 | ||||
|
Position: -144
Score: 3.88015 Sequence: TTTTTAGATTGAGATAACAGAT
Position: -88
Score: 3.92208 Sequence: AATTGATAAGAAGATCACACTA
Locus tag: Shewmr4_2291
Name: hmgA Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
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| hmgA | -144 | 3.9 | TTTTTAGATTGAGATAACAGAT | Shewmr4_2291 |
| -88 | 3.9 | AATTGATAAGAAGATCACACTA | ||
| Shewanella sp MR-7 | ||||
|
Position: -144
Score: 3.88015 Sequence: TTTTTAGATAGAGATAACAGAT
Position: -88
Score: 3.92208 Sequence: AATTGATAAGAAGATCACACTA
Locus tag: Shewmr7_2363
Name: hmgA Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
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| hmgA | -144 | 3.9 | TTTTTAGATAGAGATAACAGAT | Shewmr7_2363 |
| -88 | 3.9 | AATTGATAAGAAGATCACACTA | ||
| Shewanella sp W3-18-1 | ||||
|
Position: -66
Score: 4.14896 Sequence: AATTGATAACAAGATCACATAA
Locus tag: Sputw3181_2354
Name: hmgA Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
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| hmgA | -66 | 4.1 | AATTGATAACAAGATCACATAA | Sputw3181_2354 |