Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO4700 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella baltica OS155
Position: -154
Score: 4.60051
Sequence: AAAAGTGAACTCGTTCGCATTT
Locus tag: Sbal_0123
Name: null
Funciton: hypothetical protein
Sbal_0123 -154 4.6 AAAAGTGAACTCGTTCGCATTT Sbal_0123
Shewanella frigidimarina NCIMB 400
Position: -148
Score: 4.03384
Sequence: TAGAGTGACTAAGATCCCAATT
Locus tag: Sfri_3875
Name: null
Funciton: hypothetical protein
Sfri_3875 -148 4 TAGAGTGACTAAGATCCCAATT Sfri_3875
Shewanella halifaxensis HAW-EB4
Position: -105
Score: 4.22866
Sequence: TATTGTAAACCACGTCGCAAAT
Locus tag: Shal_0192
Name: null
Funciton: hypothetical protein
Shal_0192 -105 4.2 TATTGTAAACCACGTCGCAAAT Shal_0192
Shewanella loihica PV-4
Position: -101
Score: 3.58619
Sequence: TATTGCCAAGCGGATCGCAAAT
Locus tag: Shew_3658
Name: null
Funciton: hypothetical protein
Shew_3658 -101 3.6 TATTGCCAAGCGGATCGCAAAT Shew_3658
Shewanella oneidensis MR-1
Position: -154
Score: 4.51252
Sequence: AAAAGTGAGCCAGTTCTCAATT
Locus tag: SO4700
Name: null
Funciton: hypothetical protein
SO4700 -154 4.5 AAAAGTGAGCCAGTTCTCAATT SO4700
Shewanella piezotolerans WP3
Position: -104
Score: 3.71708
Sequence: TATTGCAAAGCGCCTCGCAAAT
Locus tag: swp_4927
Name: null
Funciton: hypothetical protein
swp_4927 -104 3.7 TATTGCAAAGCGCCTCGCAAAT swp_4927
Shewanella putrefaciens CN-32
Position: -153
Score: 4.54761
Sequence: AAAAGTGAACTAGTTCTCAATT
Locus tag: Sputcn32_0086
Name: null
Funciton: hypothetical protein
Sputcn32_0086 -153 4.5 AAAAGTGAACTAGTTCTCAATT Sputcn32_0086
Shewanella sediminis HAW-EB3
Position: -115
Score: 4.16604
Sequence: TATTGAGAATTACTTCTCAAAT
Locus tag: Ssed_0144
Name: null
Funciton: hypothetical protein
Ssed_0144 -115 4.2 TATTGAGAATTACTTCTCAAAT Ssed_0144
Shewanella sp ANA-3
Position: -154
Score: 4.34588
Sequence: AAAAGCGAACCAGTTCACAATT
Locus tag: Shewana3_4052
Name: null
Funciton: hypothetical protein
Shewana3_4052 -154 4.3 AAAAGCGAACCAGTTCACAATT Shewana3_4052
Shewanella sp MR-4
Position: -95
Score: 4.39284
Sequence: AAAAGCGACTCAGTTCACAATT
Locus tag: Shewmr4_3843
Name: null
Funciton: hypothetical protein
Shewmr4_3843 -95 4.4 AAAAGCGACTCAGTTCACAATT Shewmr4_3843
Shewanella sp MR-7
Position: -95
Score: 4.39284
Sequence: AAAAGCGACTCAGTTCACAATT
Locus tag: Shewmr7_3936
Name: null
Funciton: hypothetical protein
Shewmr7_3936 -95 4.4 AAAAGCGACTCAGTTCACAATT Shewmr7_3936
Shewanella sp W3-18-1
Position: -153
Score: 4.54761
Sequence: AAAAGTGAACTAGTTCTCAATT
Locus tag: Sputw3181_3979
Name: null
Funciton: hypothetical protein
Sputw3181_3979 -153 4.5 AAAAGTGAACTAGTTCTCAATT Sputw3181_3979
Shewanella woodyi ATCC 51908
Position: -153
Score: 4.26543
Sequence: TACTTTGACCCAGCTCAAAAAA
Position: -78
Score: 3.89827
Sequence: AAGCGTTATCATTTACACATTA
Locus tag: Swoo_0123
Name: null
Funciton: hypothetical protein
Swoo_0123 -153 4.3 TACTTTGACCCAGCTCAAAAAA Swoo_0123
-78 3.9 AAGCGTTATCATTTACACATTA
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