Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO0939 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -297
Score: 3.9359
Sequence: AATTGTGATATTGAACAATATG
Locus tag: Sama_2750
Name: SO0939
Funciton: split-soret diheme cytochrome c
Locus tag: Sama_2751
Name: null
Funciton: hypothetical protein
SO0939-Sama_2751 -297 3.9 AATTGTGATATTGAACAATATG Sama_2750
Shewanella frigidimarina NCIMB 400
Position: -325
Score: 4.52262
Sequence: ATTTGTGAGCGATATCACGTCA
Position: -147
Score: 4.43897
Sequence: TTATCTGCTTTGAATCACATTT
Locus tag: Sfri_3633
Name: SO0939
Funciton: split-soret diheme cytochrome c
Locus tag: Sfri_3634
Name: null
Funciton: hypothetical protein
SO0939-Sfri_3634 -325 4.5 ATTTGTGAGCGATATCACGTCA Sfri_3633
-147 4.4 TTATCTGCTTTGAATCACATTT
Shewanella halifaxensis HAW-EB4
Position: -328
Score: 4.17432
Sequence: AAATGAGAGGTTAATCACACAG
Position: -250
Score: 4.69242
Sequence: TAATGTGCTATCGGTCACAGAA
Locus tag: Shal_3518
Name: SO0939
Funciton: split-soret diheme cytochrome c
Locus tag: Shal_3517
Name: null
Funciton: hypothetical protein
SO0939-Shal_3517 -328 4.2 AAATGAGAGGTTAATCACACAG Shal_3518
-250 4.7 TAATGTGCTATCGGTCACAGAA
Shewanella loihica PV-4
Position: -246
Score: 4.11479
Sequence: TAGAGTGATCAGCTTCACATCG
Locus tag: Shew_0759
Name: SO0939
Funciton: split-soret diheme cytochrome c
Locus tag: Shew_0758
Name: null
Funciton: hypothetical protein
SO0939-Shew_0758 -246 4.1 TAGAGTGATCAGCTTCACATCG Shew_0759
Shewanella oneidensis MR-1
Position: -382
Score: 4.3436
Sequence: TACTGTGATCCCGTTAACCCAA
Position: -217
Score: 4.55008
Sequence: TATCGTGCCTTCGCTCACATTA
Locus tag: SO0939
Name: SO0939
Funciton: split-soret diheme cytochrome c
Locus tag: SO0938
Name: null
Funciton: hypothetical protein
SO0939-SO0938 -382 4.3 TACTGTGATCCCGTTAACCCAA SO0939
-217 4.6 TATCGTGCCTTCGCTCACATTA
Shewanella pealeana ATCC 700345
Position: -327
Score: 4.02021
Sequence: AAATGAGACGTTAGTCACACTC
Position: -249
Score: 4.53098
Sequence: TAATGTGACATCGTTCATGAAA
Locus tag: Spea_3437
Name: SO0939
Funciton: split-soret diheme cytochrome c
Locus tag: Spea_3436
Name: null
Funciton: hypothetical protein
SO0939-Spea_3436 -327 4 AAATGAGACGTTAGTCACACTC Spea_3437
-249 4.5 TAATGTGACATCGTTCATGAAA
Shewanella putrefaciens CN-32
Position: -388
Score: 4.40149
Sequence: TACTGTGATCTTGCTAACCCAA
Locus tag: Sputcn32_0879
Name: SO0939
Funciton: split-soret diheme cytochrome c
Locus tag: Sputcn32_0878
Name: null
Funciton: hypothetical protein
SO0939-Sputcn32_0878 -388 4.4 TACTGTGATCTTGCTAACCCAA Sputcn32_0879
Shewanella sediminis HAW-EB3
Position: -349
Score: 4.10731
Sequence: TTTTGCGAACAAAATCACACTG
Locus tag: Ssed_0882
Name: SO0939
Funciton: split-soret diheme cytochrome c
Locus tag: Ssed_0881
Name: null
Funciton: hypothetical protein
SO0939-Ssed_0881 -349 4.1 TTTTGCGAACAAAATCACACTG Ssed_0882
Shewanella sp ANA-3
Position: -384
Score: 4.3436
Sequence: TACTGTGATCCCGTTAACCCAA
Position: -217
Score: 3.77595
Sequence: TAATGTGCGCTGCCGCAAATTG
Locus tag: Shewana3_3344
Name: SO0939
Funciton: split-soret diheme cytochrome c
Locus tag: Shewana3_3345
Name: null
Funciton: hypothetical protein
SO0939-Shewana3_3345 -384 4.3 TACTGTGATCCCGTTAACCCAA Shewana3_3344
-217 3.8 TAATGTGCGCTGCCGCAAATTG
Shewanella sp MR-4
Position: -383
Score: 4.3436
Sequence: TACTGTGATCCCGTTAACCCAA
Position: -217
Score: 4.04131
Sequence: TAATGTGCGTTGATGCACATTG
Locus tag: Shewmr4_0782
Name: SO0939
Funciton: split-soret diheme cytochrome c
Locus tag: Shewmr4_0781
Name: null
Funciton: hypothetical protein
SO0939-Shewmr4_0781 -383 4.3 TACTGTGATCCCGTTAACCCAA Shewmr4_0782
-217 4 TAATGTGCGTTGATGCACATTG
Shewanella sp MR-7
Position: -383
Score: 4.3436
Sequence: TACTGTGATCCCGTTAACCCAA
Position: -217
Score: 3.86944
Sequence: TAATGTGCGCAGGCACACATTG
Locus tag: Shewmr7_3241
Name: SO0939
Funciton: split-soret diheme cytochrome c
Locus tag: Shewmr7_3242
Name: null
Funciton: hypothetical protein
SO0939-Shewmr7_3242 -383 4.3 TACTGTGATCCCGTTAACCCAA Shewmr7_3241
-217 3.9 TAATGTGCGCAGGCACACATTG
Shewanella sp W3-18-1
Position: -388
Score: 4.40149
Sequence: TACTGTGATCTTGCTAACCCAA
Position: -253
Score: 3.48068
Sequence: AAATGGATTTAAATTCACATAA
Locus tag: Sputw3181_3294
Name: SO0939
Funciton: split-soret diheme cytochrome c
Locus tag: Sputw3181_3295
Name: null
Funciton: hypothetical protein
SO0939-Sputw3181_3295 -388 4.4 TACTGTGATCTTGCTAACCCAA Sputw3181_3294
-253 3.5 AAATGGATTTAAATTCACATAA
Shewanella woodyi ATCC 51908
Position: -337
Score: 3.74538
Sequence: GTTTGCGAAGAGGATCACATTG
Position: -250
Score: 4.48942
Sequence: TAACATGATCCAGCTCACCATT
Locus tag: Swoo_0884
Name: SO0939
Funciton: split-soret diheme cytochrome c
Locus tag: Swoo_0883
Name: null
Funciton: hypothetical protein
SO0939-Swoo_0883 -337 3.7 GTTTGCGAAGAGGATCACATTG Swoo_0884
-250 4.5 TAACATGATCCAGCTCACCATT
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