Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing omp35 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella baltica OS155
Position: -67
Score: 3.58895
Sequence: AAATGCGTTAAACCACACAAAA
Locus tag: Sbal_3570
Name: omp35
Funciton: outer membrane porin
omp35 -67 3.6 AAATGCGTTAAACCACACAAAA Sbal_3570
Shewanella frigidimarina NCIMB 400
Position: -145
Score: 4.52387
Sequence: TTATTTGATCTAGGCCACACTA
Locus tag: Sfri_0503
Name: omp35
Funciton: outer membrane porin
omp35 -145 4.5 TTATTTGATCTAGGCCACACTA Sfri_0503
Shewanella halifaxensis HAW-EB4
Position: -150
Score: 4.4453
Sequence: AAACATGATCTAGTCCACAATT
Locus tag: Shal_0676
Name: omp35
Funciton: outer membrane porin
omp35 -150 4.4 AAACATGATCTAGTCCACAATT Shal_0676
Shewanella loihica PV-4
Position: -150
Score: 4.10094
Sequence: AAATTTGATCTGCGCCACACTC
Locus tag: Shew_3260
Name: omp35
Funciton: outer membrane porin
omp35 -150 4.1 AAATTTGATCTGCGCCACACTC Shew_3260
Shewanella oneidensis MR-1
Position: -67
Score: 4.14845
Sequence: AAATGTGTTAAACCACACAAAA
Locus tag: SO3896
Name: omp35
Funciton: outer membrane porin
omp35 -67 4.1 AAATGTGTTAAACCACACAAAA SO3896
Shewanella pealeana ATCC 700345
Position: -150
Score: 4.4453
Sequence: AAACATGATCTAGTCCACAATT
Locus tag: Spea_0589
Name: omp35
Funciton: outer membrane porin
omp35 -150 4.4 AAACATGATCTAGTCCACAATT Spea_0589
Shewanella piezotolerans WP3
Position: -150
Score: 4.12815
Sequence: AAACTTGATCTAGCCCACAATC
Locus tag: swp_4514
Name: omp35
Funciton: outer membrane porin
omp35 -150 4.1 AAACTTGATCTAGCCCACAATC swp_4514
Shewanella sediminis HAW-EB3
Position: -151
Score: 4.4453
Sequence: AAACATGATCTAGTCCACAATT
Locus tag: Ssed_4009
Name: omp35
Funciton: outer membrane porin
omp35 -151 4.4 AAACATGATCTAGTCCACAATT Ssed_4009
Shewanella sp ANA-3
Position: -67
Score: 4.14845
Sequence: AAATGTGTTAAACCACACAAAA
Locus tag: Shewana3_0733
Name: omp35
Funciton: outer membrane porin
omp35 -67 4.1 AAATGTGTTAAACCACACAAAA Shewana3_0733
Shewanella sp MR-4
Position: -67
Score: 3.74184
Sequence: AAATGTGTAAAACCACACAAAA
Locus tag: Shewmr4_3228
Name: omp35
Funciton: outer membrane porin
omp35 -67 3.7 AAATGTGTAAAACCACACAAAA Shewmr4_3228
Shewanella sp MR-7
Position: -67
Score: 3.74184
Sequence: AAATGTGTAAAACCACACAAAA
Locus tag: Shewmr7_0761
Name: omp35
Funciton: outer membrane porin
omp35 -67 3.7 AAATGTGTAAAACCACACAAAA Shewmr7_0761
Shewanella woodyi ATCC 51908
Position: -149
Score: 4.29639
Sequence: AAGTTTGATCTAGTCCACAATC
Locus tag: Swoo_4151
Name: omp35
Funciton: outer membrane porin
omp35 -149 4.3 AAGTTTGATCTAGTCCACAATC Swoo_4151
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