Orthologous regulated operons containing ccmG gene
| Regulog: | NarP - Vibrionales |
| Regulator type: | Transcription factor |
| Regulator family: | LuxR |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrate and nitrite respiration |
| Effector: | Nitrite; Nitrate |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Photobacterium profundum SS9 | ||||
|
Position: -156
Score: 3.98127 Sequence: TTTTACTATAGGGGTA
Locus tag: PBPRA0948
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: PBPRA0949
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: PBPRA0950
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: PBPRA0951
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: PBPRA0952
Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: PBPRA0953
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: PBPRA0954
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: PBPRA0955
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH |
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| ccmA-ccmB-ccmC-ccmE-ccmF-ccmG-ccmH-ccmH | -156 | 4 | TTTTACTATAGGGGTA | PBPRA0948 |
| Vibrio cholerae O1 biovar eltor str. N16961 | ||||
|
Position: -144
Score: 4.42428 Sequence: TAACTACAAAGGGTTA
Locus tag: VC2057
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: VC2056
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: VC2055
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: VC2054
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: VC2053
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: VC2052
Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: VC2051
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase |
||||
| ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG | -144 | 4.4 | TAACTACAAAGGGTTA | VC2057 |
| Vibrio fischeri ES114 | ||||
|
Position: -192
Score: 4.81165 Sequence: TACCTACAAAGTGGTA
Locus tag: VF_1824
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: VF_1823
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: VF_1822
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: VF_1821
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: VF_1820
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: VF_1819
Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: VF_1818
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: VF_1817
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: VF_1816
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH |
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| ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-ccmH-ccmH | -192 | 4.8 | TACCTACAAAGTGGTA | VF_1824 |
| Vibrio harveyi ATCC BAA-1116 | ||||
|
Position: -146
Score: 3.89761 Sequence: TAATCACTTATGGTTA
Locus tag: VIBHAR_03135
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: VIBHAR_03134
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: VIBHAR_03133
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: VIBHAR_03132
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: VIBHAR_03131
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: VIBHAR_03130
Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: VIBHAR_03129
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: VIBHAR_03128
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: VIBHAR_03127
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH |
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| ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-ccmH-ccmH | -146 | 3.9 | TAATCACTTATGGTTA | VIBHAR_03135 |
| Vibrio parahaemolyticus RIMD 2210633 | ||||
|
Position: -146
Score: 3.88445 Sequence: TAGCCACTTATGGTTA
Locus tag: VP2223
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: VP2222
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: VP2221
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: VP2220
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: VP2219
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: VP2218
Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: VP2217
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: VP2216
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: VP2215
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH |
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| ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-ccmH-ccmH | -146 | 3.9 | TAGCCACTTATGGTTA | VP2223 |
| Vibrio salmonicida LFI1238 | ||||
|
Position: -190
Score: 4.8774 Sequence: TACCCATAAGGTGGTA
Locus tag: VSAL_I2281
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: VSAL_I2280
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: VSAL_I2279
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: VSAL_I2278
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: VSAL_I2277
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: VSAL_I2276
Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: VSAL_I2275
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: VSAL_I2274
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: VSAL_I2273
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH |
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| ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-ccmH-ccmH | -190 | 4.9 | TACCCATAAGGTGGTA | VSAL_I2281 |
| Vibrio shilonii AK1 | ||||
|
Position: -145
Score: 5.05627 Sequence: TACCACTTTATGGGTA
Locus tag: VSAK1_03174
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: VSAK1_03179
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: VSAK1_03184
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: VSAK1_03189
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: VSAK1_03194
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: VSAK1_03199
Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: VSAK1_03204
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: VSAK1_03209
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: VSAK1_03214
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH |
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| ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-ccmH-ccmH | -145 | 5.1 | TACCACTTTATGGGTA | VSAK1_03174 |
| Vibrio vulnificus CMCP6 | ||||
|
Position: -146
Score: 4.32605 Sequence: TCACTCTATAGAGGTA
Locus tag: VV1_1961
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: VV1_1962
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: VV1_1963
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: VV1_1964
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: VV1_1965
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: VV1_1966
Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: VV1_1967
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: VV1_1968
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: VV1_1969
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH |
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| ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-ccmH-ccmH | -146 | 4.3 | TCACTCTATAGAGGTA | VV1_1961 |