Orthologous regulated operons containing nirD gene
| Regulog: | NarP - Vibrionales |
| Regulator type: | Transcription factor |
| Regulator family: | LuxR |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrate and nitrite respiration |
| Effector: | Nitrite; Nitrate |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Photobacterium profundum SS9 | ||||
|
Position: -106
Score: 5.06173 Sequence: TACCCCTTTAGGGCTA
Locus tag: PBPRA1428
Name: nirB Funciton: Nitrite reductase large subunit (EC 1.7.1.4)
Locus tag: PBPRA1427
Name: nirD Funciton: Nitrite reductase small subunit (EC 1.7.1.4)
Locus tag: PBPRA1426
Name: nirC Funciton: Nitrite transporter, FNT family
Locus tag: PBPRA1425
Name: cysG Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
||||
| nirB-nirD-nirC-cysG | -106 | 5.1 | TACCCCTTTAGGGCTA | PBPRA1428 |
| Vibrio fischeri ES114 | ||||
|
Position: -115
Score: 4.68903 Sequence: TACCACCTTAGAGCTA
Locus tag: VF_0776
Name: nirB Funciton: Nitrite reductase large subunit (EC 1.7.1.4)
Locus tag: VF_0775
Name: nirD Funciton: Nitrite reductase small subunit (EC 1.7.1.4)
Locus tag: VF_0774
Name: nirC Funciton: Nitrite transporter, FNT family
Locus tag: VF_0773
Name: cysG Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
||||
| nirB-nirD-nirC-cysG | -115 | 4.7 | TACCACCTTAGAGCTA | VF_0776 |
| Vibrio parahaemolyticus RIMD 2210633 | ||||
|
Position: -108
Score: 4.13577 Sequence: TACCCCTTTAGGGTAG
Position: -18
Score: 4.67024 Sequence: TAACCCTTAGGAAGTA
Locus tag: VPA0987
Name: nirB Funciton: Nitrite reductase large subunit (EC 1.7.1.4)
Locus tag: VPA0986
Name: nirD Funciton: Nitrite reductase small subunit (EC 1.7.1.4)
Locus tag: VPA0985
Name: nirC Funciton: Nitrite transporter, FNT family
Locus tag: VPA0984
Name: cysG Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
||||
| nirB-nirD-nirC-cysG | -108 | 4.1 | TACCCCTTTAGGGTAG | VPA0987 |
| -18 | 4.7 | TAACCCTTAGGAAGTA | ||
| Vibrio shilonii AK1 | ||||
|
Position: -108
Score: 3.99295 Sequence: TACCACTTTAGAGTAG
Position: -18
Score: 4.39492 Sequence: TAACACTTAGGTATTA
Locus tag: VSAK1_05765
Name: nirB Funciton: Nitrite reductase large subunit (EC 1.7.1.4)
Locus tag: VSAK1_05770
Name: nirD Funciton: Nitrite reductase small subunit (EC 1.7.1.4)
Locus tag: VSAK1_05775
Name: nirC Funciton: Nitrite transporter, FNT family
Locus tag: VSAK1_05780
Name: cysG Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
||||
| nirB-nirD-nirC-cysG | -108 | 4 | TACCACTTTAGAGTAG | VSAK1_05765 |
| -18 | 4.4 | TAACACTTAGGTATTA | ||
| Vibrio splendidus LGP32 | ||||
|
Position: -109
Score: 4.13577 Sequence: TACCCCTTTAGGGTAG
Locus tag: VS_II0668
Name: nirB Funciton: Nitrite reductase large subunit (EC 1.7.1.4)
Locus tag: VS_II0669
Name: nirD Funciton: Nitrite reductase small subunit (EC 1.7.1.4)
Locus tag: VS_II0670
Name: nirC Funciton: Nitrite transporter, FNT family
Locus tag: VS_II0671
Name: cysG Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
||||
| nirB-nirD-nirC-cysG | -109 | 4.1 | TACCCCTTTAGGGTAG | VS_II0668 |
| Vibrio vulnificus CMCP6 | ||||
|
Position: -106
Score: 4.13577 Sequence: TACCCCTTTAGGGTAG
Position: -18
Score: 4.67024 Sequence: TAACCCTTAGGAAGTA
Locus tag: VV20370
Name: nirB Funciton: Nitrite reductase large subunit (EC 1.7.1.4)
Locus tag: VV20369
Name: nirD Funciton: Nitrite reductase small subunit (EC 1.7.1.4)
Locus tag: VV20368
Name: nirC Funciton: Nitrite transporter, FNT family
Locus tag: VV20367
Name: cysG Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
||||
| nirB-nirD-nirC-cysG | -106 | 4.1 | TACCCCTTTAGGGTAG | VV20370 |
| -18 | 4.7 | TAACCCTTAGGAAGTA | ||