Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nrfA gene

Properties
Regulog: NarP - Vibrionales
Regulator type: Transcription factor
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrite; Nitrate
Phylum: Proteobacteria
Built upon 135 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -209
Score: 5.04559
Sequence: TACCCAATAAGGGGTA
Locus tag: PBPRA1258
Name: nrfA
Funciton: Nitrite reductase, cytochrome c(552)
nrfA -209 5 TACCCAATAAGGGGTA PBPRA1258
Vibrio fischeri ES114
Position: -279
Score: 4.2583
Sequence: TACTCCTTTTGTGATA
Position: -191
Score: 5.17928
Sequence: TAACACTTAAGAGGTA
Position: -101
Score: 4.73612
Sequence: TACCTCTTAATTAGTA
Locus tag: VF_1554
Name: nrfA
Funciton: Nitrite reductase, cytochrome c(552)
nrfA -279 4.3 TACTCCTTTTGTGATA VF_1554
-191 5.2 TAACACTTAAGAGGTA
-101 4.7 TACCTCTTAATTAGTA
Vibrio harveyi ATCC BAA-1116
Position: -207
Score: 5.31636
Sequence: TACCCCTTTAGAGGTA
Locus tag: VIBHAR_02727
Name: nrfA
Funciton: Nitrite reductase, cytochrome c(552)
nrfA -207 5.3 TACCCCTTTAGAGGTA VIBHAR_02727
Vibrio parahaemolyticus RIMD 2210633
Position: -293
Score: 4.09705
Sequence: TTATTCCTAAGAGGTA
Position: -189
Score: 5.38733
Sequence: TACCACTTTAGGGGTA
Locus tag: VP1929
Name: nrfA
Funciton: Nitrite reductase, cytochrome c(552)
nrfA -293 4.1 TTATTCCTAAGAGGTA VP1929
-189 5.4 TACCACTTTAGGGGTA
Vibrio salmonicida LFI1238
Position: -279
Score: 4.49404
Sequence: TACCACTTTTGTGATA
Position: -192
Score: 4.82013
Sequence: TAATACTTTAGTGGTA
Locus tag: VSAL_I1997
Name: nrfA
Funciton: Nitrite reductase, cytochrome c(552)
nrfA -279 4.5 TACCACTTTTGTGATA VSAL_I1997
-192 4.8 TAATACTTTAGTGGTA
Vibrio shilonii AK1
Position: -206
Score: 5.16179
Sequence: TACCCCTTTAGGGTTA
Locus tag: VSAK1_05600
Name: nrfA
Funciton: Nitrite reductase, cytochrome c(552)
nrfA -206 5.2 TACCCCTTTAGGGTTA VSAK1_05600
Vibrio splendidus LGP32
Position: -235
Score: 5.38733
Sequence: TACCACTTTAGGGGTA
Locus tag: VS_1933
Name: nrfA
Funciton: Nitrite reductase, cytochrome c(552)
nrfA -235 5.4 TACCACTTTAGGGGTA VS_1933
Vibrio vulnificus CMCP6
Position: -192
Score: 5.42325
Sequence: TACCCCTTTAGGGGTA
Locus tag: VV1_3035
Name: nrfA
Funciton: Nitrite reductase, cytochrome c(552)
nrfA -192 5.4 TACCCCTTTAGGGGTA VV1_3035
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