Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO3556 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -82
Score: 4.12356
Sequence: AAATTTGCCAAAGCTCACACAT
Locus tag: Sama_1067
Name: SO3553
Funciton: putative sulfate permease
Locus tag: Sama_1066
Name: null
Funciton: hypothetical protein
Locus tag: Sama_1065
Name: null
Funciton: L-sorbosone dehydrogenase
Locus tag: Sama_1064
Name: purE
Funciton: phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Locus tag: Sama_1063
Name: purK
Funciton: phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Locus tag: Sama_1062
Name: SO3556
Funciton: cyclic nucleotide phosphodiesterase, putative
SO3553-Sama_1066-Sama_1065-purE-purK-SO3556 -82 4.1 AAATTTGCCAAAGCTCACACAT Sama_1067
Shewanella denitrificans OS217
Position: -315
Score: 3.73258
Sequence: AATTCTGACTCATCTTAAATTA
Locus tag: Sden_1224
Name: purE
Funciton: phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Locus tag: Sden_1223
Name: purK
Funciton: phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Locus tag: Sden_1222
Name: SO3556
Funciton: cyclic nucleotide phosphodiesterase, putative
purE-purK-SO3556 -315 3.7 AATTCTGACTCATCTTAAATTA Sden_1224
Shewanella oneidensis MR-1
Position: -70
Score: 3.91137
Sequence: TTTTGCAACTATGATCACACAA
Locus tag: SO3553
Name: SO3553
Funciton: putative sulfate permease
Locus tag: SO3554
Name: purE
Funciton: phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Locus tag: SO3555
Name: purK
Funciton: phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Locus tag: SO3556
Name: SO3556
Funciton: cyclic nucleotide phosphodiesterase, putative
SO3553-purE-purK-SO3556 -70 3.9 TTTTGCAACTATGATCACACAA SO3553
Shewanella putrefaciens CN-32
Position: -81
Score: 3.95475
Sequence: ATTTGCAATCATGATCACACAG
Locus tag: Sputcn32_1042
Name: SO3553
Funciton: putative sulfate permease
Locus tag: Sputcn32_1041
Name: purE
Funciton: phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Locus tag: Sputcn32_1040
Name: purK
Funciton: phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Locus tag: Sputcn32_1039
Name: SO3556
Funciton: cyclic nucleotide phosphodiesterase, putative
SO3553-purE-purK-SO3556 -81 4 ATTTGCAATCATGATCACACAG Sputcn32_1042
Shewanella sp ANA-3
Position: -70
Score: 3.91137
Sequence: TTTTGCAACTATGATCACACAA
Locus tag: Shewana3_3154
Name: SO3553
Funciton: putative sulfate permease
Locus tag: Shewana3_3155
Name: purE
Funciton: phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Locus tag: Shewana3_3156
Name: purK
Funciton: phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Locus tag: Shewana3_3157
Name: SO3556
Funciton: cyclic nucleotide phosphodiesterase, putative
SO3553-purE-purK-SO3556 -70 3.9 TTTTGCAACTATGATCACACAA Shewana3_3154
Shewanella sp MR-4
Position: -70
Score: 4.47087
Sequence: TTTTGTAACTATGATCACACAA
Locus tag: Shewmr4_2974
Name: SO3553
Funciton: putative sulfate permease
Locus tag: Shewmr4_2975
Name: purE
Funciton: phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Locus tag: Shewmr4_2976
Name: purK
Funciton: phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Locus tag: Shewmr4_2977
Name: SO3556
Funciton: cyclic nucleotide phosphodiesterase, putative
SO3553-purE-purK-SO3556 -70 4.5 TTTTGTAACTATGATCACACAA Shewmr4_2974
Shewanella sp MR-7
Position: -70
Score: 4.47087
Sequence: TTTTGTAACTATGATCACACAA
Locus tag: Shewmr7_3056
Name: SO3553
Funciton: putative sulfate permease
Locus tag: Shewmr7_3057
Name: purE
Funciton: phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Locus tag: Shewmr7_3058
Name: purK
Funciton: phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Locus tag: Shewmr7_3059
Name: SO3556
Funciton: cyclic nucleotide phosphodiesterase, putative
SO3553-purE-purK-SO3556 -70 4.5 TTTTGTAACTATGATCACACAA Shewmr7_3056
Shewanella sp W3-18-1
Position: -81
Score: 3.95475
Sequence: ATTTGCAATCATGATCACACAG
Locus tag: Sputw3181_3123
Name: SO3553
Funciton: putative sulfate permease
Locus tag: Sputw3181_3124
Name: purE
Funciton: phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Locus tag: Sputw3181_3125
Name: purK
Funciton: phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Locus tag: Sputw3181_3126
Name: SO3556
Funciton: cyclic nucleotide phosphodiesterase, putative
SO3553-purE-purK-SO3556 -81 4 ATTTGCAATCATGATCACACAG Sputw3181_3123
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