Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO1326 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella baltica OS155
Position: -293
Score: 3.92942
Sequence: AATAGTGATTTTTATTGCAAAC
Position: -225
Score: 4.15862
Sequence: TGATGTGAGCAATATCTCAATG
Position: -193
Score: 4.28068
Sequence: TAATTTGAGGATGCGCACATTT
Locus tag: Sbal_1179
Name: SO1326
Funciton: COG1242: Predicted Fe-S oxidoreductase
SO1326 -293 3.9 AATAGTGATTTTTATTGCAAAC Sbal_1179
-225 4.2 TGATGTGAGCAATATCTCAATG
-193 4.3 TAATTTGAGGATGCGCACATTT
Shewanella frigidimarina NCIMB 400
Position: -128
Score: 3.91491
Sequence: TTTTTTGAGTTTGTGCACAACT
Locus tag: Sfri_2950
Name: SO1326
Funciton: COG1242: Predicted Fe-S oxidoreductase
SO1326 -128 3.9 TTTTTTGAGTTTGTGCACAACT Sfri_2950
Shewanella halifaxensis HAW-EB4
Position: -210
Score: 3.96284
Sequence: TAAAGTGATTTTTCTTGCAGAT
Locus tag: Shal_1062
Name: SO1326
Funciton: COG1242: Predicted Fe-S oxidoreductase
SO1326 -210 4 TAAAGTGATTTTTCTTGCAGAT Shal_1062
Shewanella loihica PV-4
Position: -148
Score: 4.36051
Sequence: AAAAGTGATTTTTATTGCATAT
Position: -127
Score: 4.0363
Sequence: TACAGTGAATTATTTAACAAAT
Locus tag: Shew_1033
Name: SO1326
Funciton: COG1242: Predicted Fe-S oxidoreductase
SO1326 -148 4.4 AAAAGTGATTTTTATTGCATAT Shew_1033
-127 4 TACAGTGAATTATTTAACAAAT
Shewanella oneidensis MR-1
Position: -294
Score: 4.30048
Sequence: AATAGTGATTTTTATTGCAAAT
Locus tag: SO1326
Name: SO1326
Funciton: COG1242: Predicted Fe-S oxidoreductase
SO1326 -294 4.3 AATAGTGATTTTTATTGCAAAT SO1326
Shewanella pealeana ATCC 700345
Position: -303
Score: 3.93471
Sequence: TAAATTGACCTGTATAACCTTA
Position: -201
Score: 4.00915
Sequence: TAAAGTGATTTTTTTTGCAGAT
Locus tag: Spea_1014
Name: SO1326
Funciton: COG1242: Predicted Fe-S oxidoreductase
SO1326 -303 3.9 TAAATTGACCTGTATAACCTTA Spea_1014
-201 4 TAAAGTGATTTTTTTTGCAGAT
Shewanella piezotolerans WP3
Position: -111
Score: 3.78833
Sequence: TTATTTGAGCTAGCGCTAATAA
Locus tag: swp_3802
Name: SO1326
Funciton: COG1242: Predicted Fe-S oxidoreductase
SO1326 -111 3.8 TTATTTGAGCTAGCGCTAATAA swp_3802
Shewanella putrefaciens CN-32
Position: -293
Score: 4.30048
Sequence: AATAGTGATTTTTATTGCAAAT
Position: -224
Score: 4.55994
Sequence: ATTTGTGAGGTAGATCGCTAAA
Locus tag: Sputcn32_1137
Name: SO1326
Funciton: COG1242: Predicted Fe-S oxidoreductase
SO1326 -293 4.3 AATAGTGATTTTTATTGCAAAT Sputcn32_1137
-224 4.6 ATTTGTGAGGTAGATCGCTAAA
Shewanella sp ANA-3
Position: -294
Score: 4.30048
Sequence: AATAGTGATTTTTATTGCAAAT
Locus tag: Shewana3_3048
Name: SO1326
Funciton: COG1242: Predicted Fe-S oxidoreductase
SO1326 -294 4.3 AATAGTGATTTTTATTGCAAAT Shewana3_3048
Shewanella sp MR-4
Position: -55
Score: 4.30048
Sequence: AATAGTGATTTTTATTGCAAAT
Locus tag: Shewmr4_2871
Name: Shewmr4_2871
Funciton: hypothetical protein
Locus tag: Shewmr4_2870
Name: SO1326
Funciton: COG1242: Predicted Fe-S oxidoreductase
Shewmr4_2871-SO1326 -55 4.3 AATAGTGATTTTTATTGCAAAT Shewmr4_2871
Shewanella sp MR-7
Position: -55
Score: 4.30048
Sequence: AATAGTGATTTTTATTGCAAAT
Locus tag: Shewmr7_2953
Name: Shewmr4_2871
Funciton: hypothetical protein
Locus tag: Shewmr7_2952
Name: SO1326
Funciton: COG1242: Predicted Fe-S oxidoreductase
Shewmr4_2871-SO1326 -55 4.3 AATAGTGATTTTTATTGCAAAT Shewmr7_2953
Shewanella sp W3-18-1
Position: -293
Score: 4.30048
Sequence: AATAGTGATTTTTATTGCAAAT
Position: -224
Score: 4.31526
Sequence: GTTTGTGATGTAGATCGCTAAA
Locus tag: Sputw3181_3027
Name: SO1326
Funciton: COG1242: Predicted Fe-S oxidoreductase
SO1326 -293 4.3 AATAGTGATTTTTATTGCAAAT Sputw3181_3027
-224 4.3 GTTTGTGATGTAGATCGCTAAA
Shewanella woodyi ATCC 51908
Position: -229
Score: 3.81144
Sequence: AAATATGAGTTCTATTGCAAAT
Locus tag: Swoo_1222
Name: SO1326
Funciton: COG1242: Predicted Fe-S oxidoreductase
SO1326 -229 3.8 AAATATGAGTTCTATTGCAAAT Swoo_1222
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