Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing cadC gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella baltica OS155
Position: -75
Score: 3.9787
Sequence: TTGGGTTAGCAAGATCACATTA
Locus tag: Sbal_0833
Name: cadC
Funciton: transcriptional regulator-related protein
Locus tag: Sbal_0834
Name: SO0941
Funciton: hypothetical protein
cadC-SO0941 -75 4 TTGGGTTAGCAAGATCACATTA Sbal_0833
Shewanella frigidimarina NCIMB 400
Position: -334
Score: 4.59408
Sequence: AAATGTGATTCAAAGCAGATAA
Position: -234
Score: 4.25944
Sequence: TTTCATGATGTAAGTCTCATTA
Position: -156
Score: 4.95067
Sequence: TGACGTGATATCGCTCACAAAT
Locus tag: Sfri_3632
Name: cadC
Funciton: transcriptional regulator-related protein
Locus tag: Sfri_3631
Name: SO0941
Funciton: hypothetical protein
cadC-SO0941 -334 4.6 AAATGTGATTCAAAGCAGATAA Sfri_3632
-234 4.3 TTTCATGATGTAAGTCTCATTA
-156 5 TGACGTGATATCGCTCACAAAT
Shewanella halifaxensis HAW-EB4
Position: -227
Score: 4.62594
Sequence: TTCTGTGACCGATAGCACATTA
Position: -149
Score: 4.38049
Sequence: CTGTGTGATTAACCTCTCATTT
Locus tag: Shal_3519
Name: cadC
Funciton: transcriptional regulator-related protein
Locus tag: Shal_3520
Name: SO0941
Funciton: hypothetical protein
cadC-SO0941 -227 4.6 TTCTGTGACCGATAGCACATTA Shal_3519
-149 4.4 CTGTGTGATTAACCTCTCATTT
Shewanella loihica PV-4
Position: -234
Score: 3.8977
Sequence: CGATGTGAAGCTGATCACTCTA
Locus tag: Shew_0760
Name: cadC
Funciton: transcriptional regulator-related protein
Locus tag: Shew_0761
Name: SO0941
Funciton: hypothetical protein
cadC-SO0941 -234 3.9 CGATGTGAAGCTGATCACTCTA Shew_0760
Shewanella oneidensis MR-1
Position: -246
Score: 4.25584
Sequence: TAATGTGAGCGAAGGCACGATA
Locus tag: SO0940
Name: cadC
Funciton: transcriptional regulator-related protein
Locus tag: SO0941
Name: SO0941
Funciton: hypothetical protein
cadC-SO0941 -246 4.3 TAATGTGAGCGAAGGCACGATA SO0940
Shewanella pealeana ATCC 700345
Position: -227
Score: 4.21683
Sequence: TTTCATGAACGATGTCACATTA
Position: -149
Score: 3.83129
Sequence: GAGTGTGACTAACGTCTCATTT
Locus tag: Spea_3438
Name: cadC
Funciton: transcriptional regulator-related protein
Locus tag: Spea_3439
Name: SO0941
Funciton: hypothetical protein
cadC-SO0941 -227 4.2 TTTCATGAACGATGTCACATTA Spea_3438
-149 3.8 GAGTGTGACTAACGTCTCATTT
Shewanella piezotolerans WP3
Position: -258
Score: 4.25229
Sequence: TTTATTGATCTAGATCTAATAA
Locus tag: swp_4010
Name: cadC
Funciton: transcriptional regulator-related protein
Locus tag: swp_4009
Name: SO0941
Funciton: hypothetical protein
cadC-SO0941 -258 4.3 TTTATTGATCTAGATCTAATAA swp_4010
Shewanella sediminis HAW-EB3
Position: -147
Score: 4.6755
Sequence: CAGTGTGATTTTGTTCGCAAAA
Locus tag: Ssed_0883
Name: cadC
Funciton: transcriptional regulator-related protein
Locus tag: Ssed_0884
Name: SO0941
Funciton: hypothetical protein
cadC-SO0941 -147 4.7 CAGTGTGATTTTGTTCGCAAAA Ssed_0883
Shewanella sp MR-4
Position: -246
Score: 3.82214
Sequence: CAATGTGCATCAACGCACATTA
Locus tag: Shewmr4_0783
Name: cadC
Funciton: transcriptional regulator-related protein
Locus tag: Shewmr4_0784
Name: SO0941
Funciton: hypothetical protein
cadC-SO0941 -246 3.8 CAATGTGCATCAACGCACATTA Shewmr4_0783
Shewanella sp MR-7
Position: -246
Score: 3.83432
Sequence: CAATGTGTGCCTGCGCACATTA
Locus tag: Shewmr7_3240
Name: cadC
Funciton: transcriptional regulator-related protein
Locus tag: Shewmr7_3239
Name: SO0941
Funciton: hypothetical protein
cadC-SO0941 -246 3.8 CAATGTGTGCCTGCGCACATTA Shewmr7_3240
Shewanella woodyi ATCC 51908
Position: -232
Score: 4.15976
Sequence: AATGGTGAGCTGGATCATGTTA
Position: -145
Score: 4.46661
Sequence: CAATGTGATCCTCTTCGCAAAC
Locus tag: Swoo_0885
Name: cadC
Funciton: transcriptional regulator-related protein
Locus tag: Swoo_0886
Name: SO0941
Funciton: hypothetical protein
cadC-SO0941 -232 4.2 AATGGTGAGCTGGATCATGTTA Swoo_0885
-145 4.5 CAATGTGATCCTCTTCGCAAAC
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