Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nhaD gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -112
Score: 3.90386
Sequence: AATTTTTACGTGATTCAGATAA
Position: -107
Score: 4.09989
Sequence: TTACGTGATTCAGATAAAGCTT
Position: -87
Score: 4.71173
Sequence: TTTTGTGGTGTATTTCGCATTT
Locus tag: Sama_2754
Name: SO0934
Funciton: Putative salt-induced outer membrane protein
Locus tag: Sama_2753
Name: nhaD
Funciton: Na+/H+ antiporter NhaD type
SO0934-nhaD -112 3.9 AATTTTTACGTGATTCAGATAA Sama_2754
-107 4.1 TTACGTGATTCAGATAAAGCTT
-87 4.7 TTTTGTGGTGTATTTCGCATTT
Shewanella loihica PV-4
Position: -227
Score: 3.77031
Sequence: AAGCGTGATCCTGTGCTAACTT
Position: -77
Score: 4.18783
Sequence: AAACTTGAGGCGCATCAAAATT
Locus tag: Shew_0699
Name: nhaD
Funciton: Na+/H+ antiporter NhaD type
nhaD -227 3.8 AAGCGTGATCCTGTGCTAACTT Shew_0699
-77 4.2 AAACTTGAGGCGCATCAAAATT
Shewanella oneidensis MR-1
Position: -278
Score: 4.33848
Sequence: CAATGTGATTGCTATCAACATA
Locus tag: SO0935
Name: nhaD
Funciton: Na+/H+ antiporter NhaD type
nhaD -278 4.3 CAATGTGATTGCTATCAACATA SO0935
Shewanella sp ANA-3
Position: -239
Score: 4.27029
Sequence: CAATGTGATTGATATCAATAAA
Locus tag: Shewana3_3348
Name: nhaD
Funciton: Na+/H+ antiporter NhaD type
nhaD -239 4.3 CAATGTGATTGATATCAATAAA Shewana3_3348
Shewanella sp MR-4
Position: -239
Score: 4.27029
Sequence: CAATGTGATTGATATCAATAAA
Locus tag: Shewmr4_0778
Name: nhaD
Funciton: Na+/H+ antiporter NhaD type
nhaD -239 4.3 CAATGTGATTGATATCAATAAA Shewmr4_0778
Shewanella sp MR-7
Position: -239
Score: 4.27029
Sequence: CAATGTGATTGATATCAATAAA
Locus tag: Shewmr7_3245
Name: nhaD
Funciton: Na+/H+ antiporter NhaD type
nhaD -239 4.3 CAATGTGATTGATATCAATAAA Shewmr7_3245
© 2009-2020 RegPrecise